| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_2116 |
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| Symbol | |
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| ID | 4604366 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2558010 |
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| End bp | 2560658 |
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| Gene Length | 2649 bp |
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| Protein Length | 882 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639781501 |
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| Product | hypothetical protein |
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| Protein accession | YP_927991 |
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| Protein GI | 119775251 |
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| COG category | |
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| COG ID | |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 15 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCACAACA AGACTCGAAA GCACTGGCTG CCATCCGCAG TCGCTCTGGC CGTGGCATTG
CAACTGGGGG GCTGCTTTTC TGACAGCGAA GACACCGCAC CAACGCCACC GCCACCGGTT
GTCACACCGC CCACCTCCGG CGGACCCAGC TTTCCTGAAG GCGCCATCAT GATTGAAGCG
GGCGACAACT TAACTACCCG CATTCAGGAA GCCCTGATTA ACGCCCAGAG CGGCGATGTG
ATAGTGCTGC CAAAGGGCCG GTTTGAGATC CAGTCTACCC TGCTGTTTGA CGGTGATGTG
GACGGTGACG GTGCCTTTGC CAAAAACGTC ACCATCATGG GATATGGCAT GGACGAAACC
GTGCTGGACT TTGCCAATGC CAACTCTGGA GACGGCATCT TCGTACAAAA CGCCATGCAG
ATCACCATTG CGGATCTGTC TGTTTATGAA GCCAAAAACA ACGGCATCAA GCTGAAAAAC
ACCAATGGCA TCATACTGCG TAAAGTTGGC GCCGTTTGGG AAGGCGCGCT GGACAAGGAC
AACGGCGCCT ATGGACTCTA CCCGGTAGAG TGCGAAAACA TTCTGATTGA AGACAGCTAC
GTACGTGGCA GCGCCGATGC CGGTATCTAC GTTGGCCAAT CCGAATATAT CGTCGTGCGC
AACAACATCG CCAAAGAAAA CGTGGCCGGT ATCGAGATTG AAAACAGCCG CTATGCCGAC
GTTTACAACA ACGAAGCCAT GGGTAACACC GGCGGTATTC TGGTATTTGA CCTGCCCATC
AATAACCACA GATACGGCTC CAGCGTGAGG ATTTTTGACA ACAAGGTCTA CGACAACAAT
ACCCACAACT TTGCCAATGC CTCAGCCAAT CCAGCCGGCG TACACATAGT GCCGCCCGGC
ACCGGTGTGA TTATTCTCTC CACCAACGAC GTGGAGATTT TCAATAACCA AATCACCAAT
CACGACACCC TTGGCCTGAC GGTATCGAGC TTCTTCATTG CCGAACCCGA AATCAGCGAC
TTTGTTGCCA ACTACGGCCA GCCCGGTCAG TCCATCGAAG ATGGCTGGCG CCCTGTACCC
CGTAATATTT ATGTGCATGA CAACGAGATA AGCGGCTACG GCGCCAAACC CAACGGCTAC
CTCATCACCG ACATCATCAA TGCCTACGTG TTGACCCACG GCGCCATGCC CGGGATCCTC
TATGACGGTT TGGGTGAACT GCTCGCCAAC AATGGCACCG CCGCCTATCT GGGACTCAGG
GAAATGCCTT TCGCTGCGGA CGGCAGTGAC AATGTCTGTA TGCAAAATAA CGGCGATGTC
AGCATGGGGC AGCTTTACAG CAACAGCAAT ACCGACATGA GCATTGCCGA TGTGCTGTAC
GAGAAGACCC AAACCAATCT GCTTAAATGT GCCCAGGTGA GCCTGCCGGT GCACACAGTC
ACCTTTGGCG AACAAATTTT CGGTTGCGGC GTGGATGACG ATACCGCAGG CTGCGATGGC
GGCAACCTGA TTGGTGGTGG TGGCACCATT GGCGACGGTG ACGGCGGCAT CATTGGCGAT
GGCGATCAGG CACTGTGCGA CAGCACGGCC TCCGGTGTGA ACTGGAATGC CCTGGCCAAA
GCCAACTGCC CCAAGCTGTC TGACTATGGG CTGTTTGCCG ATGAAACCGA CCCCACTCAA
AATGCCAATG GCGGCATGCC CTATGATTTG AACACTCAGC TGTTCACCGA CTACGCCAGC
AAATACCGTT TCGTGTTTAT GCCGGATGGT ACCAAGGCCC AATACAGTGA AAACGAAGCC
TTTGATTTCC CGGTGGGTAC AGTGATATCC AAAACCTTCG CCCTGCCTGC TGACACCAGC
AAGCGCGGCA TCGCCAATGA GGATTTGATT GAGACCCGCC TGCTCATCAA GCGTGCCAGC
GGCTGGACCG CCCTGCCCTA TGTGTGGAAT GCCCAAAAGA GCGATGCTGT GCTGACCAAA
CCCGGCGCCA TTCAGGCCAA GACGGTCATG CACAAGGGCG AAGCCAAAAC CTTTGACTAT
GTCGTGCCTT CCATCAACCA GTGTAAACAG TGTCATCAAT TCAAGGCCGA GGGCGACGAG
TTCCCACGCT TTGTGCCCAT AGGACCAAAG GCACGTTTCC TTAACGGTGA CTTTGCCTAT
GCCGACGCCA CAGTGAACCA ACTCAGTCGT TGGCAGAGCG CCGGAATACT GGAAGGCCTG
CCTGAACTGT CCAGCGTACC CAAGGTCCCG GCCTTCCACG ATGGTGATGA AGCTGGCCTC
GCAGCACTTG ACGATGCCAG CCTGATGCAA ACCGCCAAGG GATATCTGGA TATCAACTGC
GCCCACTGTC ACCGCCCCGA AGGCAACGCC TCCAACACAG GACTCAAGCT TGAGTACTGG
CGCGGTTATG GCGATGACAA TGGTTACTCC CACGGCACCT GTAAGCAGCC GGTGGCCTAC
GGTGGCGGCA GCCTGGGCTA TGACGTGGTG CCCACAAAAC CAGACAGCTC CATCATGCAT
TTCAGGATGG CAAGCACTGA GCCCGGGGAT CGCATGCCAG AGATTGGTCG CAGCCTCGCC
CATGAGGAAG GTGTCGCCCT TATCCATGAA TGGATAAAAC GCCTGCCTGC GGCAGCCTGC
TCCAACTGA
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| Protein sequence | MHNKTRKHWL PSAVALAVAL QLGGCFSDSE DTAPTPPPPV VTPPTSGGPS FPEGAIMIEA
GDNLTTRIQE ALINAQSGDV IVLPKGRFEI QSTLLFDGDV DGDGAFAKNV TIMGYGMDET
VLDFANANSG DGIFVQNAMQ ITIADLSVYE AKNNGIKLKN TNGIILRKVG AVWEGALDKD
NGAYGLYPVE CENILIEDSY VRGSADAGIY VGQSEYIVVR NNIAKENVAG IEIENSRYAD
VYNNEAMGNT GGILVFDLPI NNHRYGSSVR IFDNKVYDNN THNFANASAN PAGVHIVPPG
TGVIILSTND VEIFNNQITN HDTLGLTVSS FFIAEPEISD FVANYGQPGQ SIEDGWRPVP
RNIYVHDNEI SGYGAKPNGY LITDIINAYV LTHGAMPGIL YDGLGELLAN NGTAAYLGLR
EMPFAADGSD NVCMQNNGDV SMGQLYSNSN TDMSIADVLY EKTQTNLLKC AQVSLPVHTV
TFGEQIFGCG VDDDTAGCDG GNLIGGGGTI GDGDGGIIGD GDQALCDSTA SGVNWNALAK
ANCPKLSDYG LFADETDPTQ NANGGMPYDL NTQLFTDYAS KYRFVFMPDG TKAQYSENEA
FDFPVGTVIS KTFALPADTS KRGIANEDLI ETRLLIKRAS GWTALPYVWN AQKSDAVLTK
PGAIQAKTVM HKGEAKTFDY VVPSINQCKQ CHQFKAEGDE FPRFVPIGPK ARFLNGDFAY
ADATVNQLSR WQSAGILEGL PELSSVPKVP AFHDGDEAGL AALDDASLMQ TAKGYLDINC
AHCHRPEGNA SNTGLKLEYW RGYGDDNGYS HGTCKQPVAY GGGSLGYDVV PTKPDSSIMH
FRMASTEPGD RMPEIGRSLA HEEGVALIHE WIKRLPAAAC SN
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