| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1960 |
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| Symbol | |
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| ID | 4604210 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 2389189 |
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| End bp | 2389401 |
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| Gene Length | 213 bp |
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| Protein Length | 70 aa |
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| Translation table | 11 |
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| GC content | 48% |
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| IMG OID | 639781337 |
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| Product | cold-shock DNA-binding domain-containing protein |
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| Protein accession | YP_927835 |
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| Protein GI | 119775095 |
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| COG category | [K] Transcription |
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| COG ID | [COG1278] Cold shock proteins |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 0.507319 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 7 |
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| Fosmid unclonability p-value | 0.106232 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGTCGGCCC CACAGCACAC TGGTACAGTA AAATGGTTTA ACGACGAGAA AGGTTTTGGC
TTCCTGAGTC GCGATAATGA TTCAGATGTA TTTGTTCACT ACCGCGCTAT CAATACTCAG
GGAAGACGCA CTTTAAAAGA AGGTCAAAAA GTCAGCTTCA GCCTGGTTGA AGGCCAAAAG
GGCCTCCTGG CAGCAAACGT CACGCCACTG TGA
|
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| Protein sequence | MSAPQHTGTV KWFNDEKGFG FLSRDNDSDV FVHYRAINTQ GRRTLKEGQK VSFSLVEGQK
GLLAANVTPL
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