| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1728 |
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| Symbol | |
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| ID | 4603978 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 2113784 |
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| End bp | 2116132 |
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| Gene Length | 2349 bp |
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| Protein Length | 782 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639781091 |
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| Product | ribonucleotide-diphosphate reductase subunit alpha |
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| Protein accession | YP_927603 |
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| Protein GI | 119774863 |
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| COG category | [F] Nucleotide transport and metabolism |
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| COG ID | [COG0209] Ribonucleotide reductase, alpha subunit |
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| TIGRFAM ID | [TIGR02506] ribonucleoside-diphosphate reductase, alpha subunit |
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Plasmid Coverage information |
| Num covering plasmid clones | 9 |
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| Plasmid unclonability p-value | 0.742662 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 4 |
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| Fosmid unclonability p-value | 0.011326 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCACGAT TGTTTACATG GATATGTAGG GCAATACCAA TCTATAAAGG CCTATCTTCA
ATGAATAGCA ACATGACAGT CACAAAACGC AGTGGCGAAC GCGAGCAGAT CGATCTCGAC
AAAATCCATC GCGTGGTTAC CTGGGCCGCC AAGGGCTTAA AAAATGTTTC CGTTTCTGAA
GTAGAACTGC GTTCGCACCT GCAGTTTTTT GAAGGCATCC CTACCGAAGC CATCCACGAA
ACCATTATTA AAGCTGCTGC GGATCTGATC TCTCCCGAGT CTCCAGATTA TCAGTTCCTG
GCCGCCCGTT TGGCTGTATT CCATCTTCGC AAGAAGGCCT TTGGCCAGTT CGAGCCGCCT
AAGCTGTATG ATCACGTGGT CAAGCTGGTC GAGATGGGCA AGTATGACCG CCACATCCTC
GAAGACTACA CCAAAGAAGA ACTGGACGTT TTAGACAGCT ACATAGACCA CTGGCGCGAT
ATGAATTTCT CATACGCCGC CGTGAAGCAG CTGGAAGGCA AATACCTGGT TCAAAACCGT
GTCACTCACG AAGTGTACGA GAGCGCCCAG TTCCTCTACA TCCTGGTTGC AGCCTGCTTG
TTTGCCGGTT ATCCAAAAGA GACCCGTCTG AAGTATGTAA AAGACTTCTA TGATGCAGTA
TCTACCTTCA AGATTTCGCT GCCTACACCC ATCATGTCCG GTGTACGTAC TCCTACCCGC
CAGTTCAGCT CCTGCGTACT GATTGAGTGT GGTGACAGCC TGGATTCTAT CAACGCCACT
GCCTCTTCCA TCGTGAAGTA CGTGAGTCAG CGCGCCGGTA TCGGCGTGAA TGCAGGCCGT
ATCCGCGCCC TGGGCAGCCC AATCCGTGGC GGTGAAGCGT TCCATACTGG CTGTCTGCCT
TTCTATAAGT ATTTCCAGAC TGCGGTGAAG TCCTGCTCTC AGGGCGGTGT GCGTGGCGGC
GCGGCAACGC TGTTCTATCC AATTTGGCAC CTGGAAGTAG AGTCGCTGCT GGTGCTGAAG
AATAACCGCG GCGTTGAAGA CAACCGTATC CGGCATCTGG ACTATGGCGT ACAGCTGAAC
AAACTCATGT ATCAGCGCCT GATCAAGGGT GAGAACATCA CCCTGTTCAG CCCGTCAGAC
GTGCCCGGCC TGTACGATGC CTTCTTTGAA AATCAGGATG AATTCGAGCG CCTGTACACC
AAGTACGAGC AAGAACCGAG CATCCGTAAA AAGTCGCTTA AGGCCGTTGA ACTGTTCTCA
TTGATGATGC AGGAACGTGC CTCAACCGGT CGTATCTATG TGCAGAACGT GGATCACTGC
AACACCCACA GCCCATTTGA CTCAAGCGTT GCCCCTATCC GCCAGTCAAA CCTGTGTCTG
GAAATTGCAC TGCCAACCAA ACCACTGGAC AGCGTGGACG ATACCAATGG TGAAATCGCA
CTCTGTACTC TGTCAGCACT GAATTTGGGT GCCATCGAGA ACCTTGAAGA ACTCGAAGGT
TTGTCAGACC TCGCGGTACG TGCTCTCGAT AGCCTGCTGG ACTATCAGGA CTACCCCATC
AAGGCAGCCA AGCTTGGCTC CATGAACCGT CGTACCCTGG GTATTGGTGT GATTAACTTT
GCCAACTACC TGGCTAAAAA CGGCAAAAAA TATTCAGATG GCAGTGCCAA CAACCTGACC
CACAAGACAT TCGAAGCTAT TCAGTTCAAC CTGCTGAAAG CCTCGATGAA TCTGGCAAAG
GAAAAAGGCG CCTGTCCGGC GTTCCATGAG ACGACTTACT CTCAGGGTAT TCTGCCAATC
GACACCTATA AGCGCGATCT GGACAAGATT TGCGATGAGC CGCTGCATCT GGATTGGGAA
GGACTGCGTG CCGATATCAA GCACTACGGC CTGCGTAACT CTACCCTGTC AGCACTGATG
CCGTCAGAGA CTTCTTCTCA GATCTCCAAT GCCACCAACG GTATCGAGCC ACCCCGTGGT
CTGATTTCGG TGAAAGCCAG TAAAGACGGT CAGCTCAAGC AAGTCGTGCC TGACTTTGAT
GAATTGCGCA ACGCGTACGA ATTGCTGTGG CAAATGCCGT CAAACGACGG TTACCTGCAA
TTGGTTGGCA TTATGCAGAA GTTTGTGGAT CAGGCGATTT CTGCCAACAC CAACTATGAC
CCCGCCAAGT TCGAGGGTCG TAAGGTACCA ATGCAGCTGC TGCTTAAAGA TCTACTTACC
GCATACAAAC TGGGCCTCAA AACCCTCTAC TACCATAACA CCCGTGATGG TGCGACCGAT
CAGCATGATG ACATTGCTGT GGTTGAAAAA GAGGACGACG GCTGCGCCGG TGGTGCCTGT
AAGATTTAA
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| Protein sequence | MARLFTWICR AIPIYKGLSS MNSNMTVTKR SGEREQIDLD KIHRVVTWAA KGLKNVSVSE
VELRSHLQFF EGIPTEAIHE TIIKAAADLI SPESPDYQFL AARLAVFHLR KKAFGQFEPP
KLYDHVVKLV EMGKYDRHIL EDYTKEELDV LDSYIDHWRD MNFSYAAVKQ LEGKYLVQNR
VTHEVYESAQ FLYILVAACL FAGYPKETRL KYVKDFYDAV STFKISLPTP IMSGVRTPTR
QFSSCVLIEC GDSLDSINAT ASSIVKYVSQ RAGIGVNAGR IRALGSPIRG GEAFHTGCLP
FYKYFQTAVK SCSQGGVRGG AATLFYPIWH LEVESLLVLK NNRGVEDNRI RHLDYGVQLN
KLMYQRLIKG ENITLFSPSD VPGLYDAFFE NQDEFERLYT KYEQEPSIRK KSLKAVELFS
LMMQERASTG RIYVQNVDHC NTHSPFDSSV APIRQSNLCL EIALPTKPLD SVDDTNGEIA
LCTLSALNLG AIENLEELEG LSDLAVRALD SLLDYQDYPI KAAKLGSMNR RTLGIGVINF
ANYLAKNGKK YSDGSANNLT HKTFEAIQFN LLKASMNLAK EKGACPAFHE TTYSQGILPI
DTYKRDLDKI CDEPLHLDWE GLRADIKHYG LRNSTLSALM PSETSSQISN ATNGIEPPRG
LISVKASKDG QLKQVVPDFD ELRNAYELLW QMPSNDGYLQ LVGIMQKFVD QAISANTNYD
PAKFEGRKVP MQLLLKDLLT AYKLGLKTLY YHNTRDGATD QHDDIAVVEK EDDGCAGGAC
KI
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