| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1553 |
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| Symbol | |
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| ID | 4603805 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1889813 |
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| End bp | 1891294 |
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| Gene Length | 1482 bp |
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| Protein Length | 493 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639780908 |
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| Product | hypothetical protein |
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| Protein accession | YP_927430 |
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| Protein GI | 119774690 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG2267] Lysophospholipase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.0111304 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAACCT TACTGCTGAG CACGTCAAAG CACTTTTTAA TTGCCGTGGT TTACGGGACT
TTGGGTGTGT GTATTACGGC CTTGGGATTT GGAGTGTGGT TTCTCAATAG CCGTCCTGAC
TTGGATATAT GGCATACCAC AGACTTACAG CATCGCTTTA CCCGTCAGTC TGAGGTACGG
GATTTTGCCG GATATCTGGC CCTTGAGGCG GCACTCAAGC AGGAAATCGG CACCCGTATT
TATGCCAAAA CAGCGGGGTT GGACTCGCCG GTGAACCGTT ATGTAAAGGG GAGTTTATCT
GCGCCCAGCC ATTGGTCCCA GGATTGGAAC TGGAGCTACG AGTGGCCGAA TGCCGACGCC
GATTATGGCG TACTACTGCT TCATGGCATG TCCGACTCTC CTTATGCCTT ATCGAACCTC
GCAGAAGATC TGAAACCTAA TGCACATGTA TTGGGTCTGC GATTGCCGGG CCATGGCACC
TTGCCCTCGG GGTTAGTGCG GCTGGAGTGG CAGGATATGA GTGCGGCCGT CGCAATCGCG
ATACGCCACC TTAAAGCAGT GCTTGGTGAG CGGCCACTGT ATATCGTGGG ATTTTCCACC
GGTGCTGCGT TGGCGCTGCA TCACGAACTT GAGCGCATCG GGGCGGGTAA GACGCCAGAC
AGTGAGGCCA TGGTCTTTTT GTCGCCTGCC ATCGGGCTTG CGCCTGTGGC GCGCGGCGCA
TATTGGCAGG CACGTCTTGG TGAGTGGCTT GGACTGGAGA AGCTTGCCTG GAATGCGCTG
GGGAGCGAGT ACGACCCCTT CAAGTACGTG TCGTTTGCGG TAAATGCGGG GGATGTGGTG
TATCGGCTGG CTCAGGAGAA TCAGCGGCAA CTGCAATTGT TAAGCCCCAG TCAAAAGGCT
TTGCTGCCAA CGCTACTGAC CTTTCAATCA ATGGCAGATG ACACAGTGTC CAGTCGTGCC
GTGGTTGAGT CGTTATATCT GAAATTAACT GAGTCCAGGC ATCAGTTGGT GTTATACGAT
GTTAACCGTA GTCCAATAAA TCAGCCGCTT ACCCAGTGGG ACCCAAGACC TGAGCTTGAG
CGTTTGTACC GCTCGCCAGG TATGCAGGTC AGAGTCGGTG TGGTACAAAA CCGAACCCTG
GTCGATGGCA GTCATCCACT CTCGGTTGAG TTTAAACCTT TGGTGCCCCA GGGAGAGGCG
ATACCGCTGT CGCAGAGTTG GCCGATGAAC GTGTACTCCC TATCCCACGT AGCGCTGCCA
TTTTCAAAGT CCGACAGCCT TTATGGCCAG GGCGTAGTGC CACACAAGGA CAGGATCCAG
ATAGGTGCGG CGGCATCACG GGGTGAGCGA GGCATTTTTG CCGTCAGCGC TGATGAGATG
CTGCGCCAGA AATGGAATCC GTTTTACGAA TTTCAGTTAT CAATAATCAA TGATTTATTT
AATGATCCTC TGCGGTCGAG CGAAGTAGGG AAAGCGCCTT AG
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| Protein sequence | MKTLLLSTSK HFLIAVVYGT LGVCITALGF GVWFLNSRPD LDIWHTTDLQ HRFTRQSEVR
DFAGYLALEA ALKQEIGTRI YAKTAGLDSP VNRYVKGSLS APSHWSQDWN WSYEWPNADA
DYGVLLLHGM SDSPYALSNL AEDLKPNAHV LGLRLPGHGT LPSGLVRLEW QDMSAAVAIA
IRHLKAVLGE RPLYIVGFST GAALALHHEL ERIGAGKTPD SEAMVFLSPA IGLAPVARGA
YWQARLGEWL GLEKLAWNAL GSEYDPFKYV SFAVNAGDVV YRLAQENQRQ LQLLSPSQKA
LLPTLLTFQS MADDTVSSRA VVESLYLKLT ESRHQLVLYD VNRSPINQPL TQWDPRPELE
RLYRSPGMQV RVGVVQNRTL VDGSHPLSVE FKPLVPQGEA IPLSQSWPMN VYSLSHVALP
FSKSDSLYGQ GVVPHKDRIQ IGAAASRGER GIFAVSADEM LRQKWNPFYE FQLSIINDLF
NDPLRSSEVG KAP
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