| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1531 |
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| Symbol | |
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| ID | 4603783 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1861570 |
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| End bp | 1862484 |
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| Gene Length | 915 bp |
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| Protein Length | 304 aa |
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| Translation table | 11 |
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| GC content | 55% |
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| IMG OID | 639780881 |
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| Product | dihydrodipicolinate synthetase family protein |
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| Protein accession | YP_927408 |
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| Protein GI | 119774668 |
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| COG category | [E] Amino acid transport and metabolism
[M] Cell wall/membrane/envelope biogenesis |
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| COG ID | [COG0329] Dihydrodipicolinate synthase/N-acetylneuraminate lyase |
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| TIGRFAM ID | [TIGR00674] dihydrodipicolinate synthase |
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Plasmid Coverage information |
| Num covering plasmid clones | 6 |
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| Plasmid unclonability p-value | 0.00114549 |
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| Plasmid hitchhiking | Yes |
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| Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAAAGTTA ACTGGCAAGG CGTATATCCA GCGATTTCTA CCCAATTCAA TGAAGATGGC
TCTATCAATT TCGCCTCCAA CACCCGTATG TTGGAACAAC TTATCCTGGA TGGCATTAAC
GGCATCATCG CCCTGGGTAC CATAGGTGAA AACGCGTCTT TAAGCGCTGA CGAAAAACGC
GCCTTCCTTA AGCACACGGT CGAAACCGTT GCCGGACGCA TTCCCGTGAT TGCCGGTTGT
ACCGAAAATA CGGCCCAGTT AGCCATCCAG TATGTCCAGG ACGTAGAAGC CATCGGGGTT
GATGGGGTTA TGTTGCTGCC GGCCGTGGTT TATCGTGGCA CCGACCGTGA AGTGCTGACC
CACTACCAGA TGGTGGCCCG CGCCACCAGA CTGCCTATCA TGATCTATAA CAATCCAGTG
AGTTACGGCG TTGATATTAA TTTGGACATG ACCGCCATTC TCGCCAACGA GCCCAACATA
GTGGCGATTA AGGAATCCAC CACGGACACC CGCCGCCTCA CCGAGTTGCA AAGCCGCTTC
GGCGATCGTT TCACCCTGTT CTGCGGCGTG GACGATATCG CGCTTGAGTC TCTGTTATTG
GGTGCCACCG GCTGGATTTC CGGCCTGACC AACGTGTTCC CCCGTGAGTC GGTCACCCTC
TATAAGCTCG CCCGCGCCGG TCGCATGGAA GAAGCCCGTG AAATCTATCG CTGGTTTATG
CCACTGCTGC GCCTCGATAC CATTCCAACT CTGGTGCAGT GCATCAAGTT TGCCGAGCAA
CTGGCCGGTC GTGGCAGCGA GCAGGTGCGC ATGCCCCGCA TGACGCTCAT CGGCGATGAG
CGGGCCTATG TTGAGAACGT CGTGGGAGAA GCCATGGCCA ATCGCATCGA TTTATCCAAA
TACAATCTGG ACTGA
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| Protein sequence | MKVNWQGVYP AISTQFNEDG SINFASNTRM LEQLILDGIN GIIALGTIGE NASLSADEKR
AFLKHTVETV AGRIPVIAGC TENTAQLAIQ YVQDVEAIGV DGVMLLPAVV YRGTDREVLT
HYQMVARATR LPIMIYNNPV SYGVDINLDM TAILANEPNI VAIKESTTDT RRLTELQSRF
GDRFTLFCGV DDIALESLLL GATGWISGLT NVFPRESVTL YKLARAGRME EAREIYRWFM
PLLRLDTIPT LVQCIKFAEQ LAGRGSEQVR MPRMTLIGDE RAYVENVVGE AMANRIDLSK
YNLD
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