Gene Sama_1529 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1529 
Symbol 
ID4603781 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1858940 
End bp1860487 
Gene Length1548 bp 
Protein Length515 aa 
Translation table11 
GC content58% 
IMG OID639780879 
Productfatty aldehyde dehydrogenase 
Protein accessionYP_927406 
Protein GI119774666 
COG category[C] Energy production and conversion 
COG ID[COG1012] NAD-dependent aldehyde dehydrogenases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones11 
Fosmid unclonability p-value0.908196 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGACCACCG ACCTTTGTGG CCGGCACTTC ATTGCCCATG AATGGCACCA AAGTGAAGCC 
AGCTTTACCC GTTTCAACCC CAGTACCAAC TCGGTTCTGC CCGGCGCGTT TTCCCAGGGC
ACAGTTGTTG AGGTTGAAGC TGCGGCCATT GCGGCCGATG CCGCCTTCTG GGAATTCCAG
CAAACCTCTG CCGACCAGAA GGCAAAGCTG CTGGAGACCA TGGCAAAAGA AATTGAGCAG
GATGGCGACG CCATTGTTGC CTGCGCTATG TTGGAGTCGG GCCTGCCCGA GGCGCGCCTT
AAGGGCGAAC TTGGCCGTAC TGCGGGCCAG CTGCGGCTGT TTGCCAGTGT CCTTCGTGAG
CCCTATTCCC CGCTTTTGAT GGACAAAGCC AACCCAGATC GCCAGCCCCT GCCCAAGCCG
GAGTTAAAAT TAGGTCAGCT CCCCTTGGGG GTGGTGGCTG TATTTGGCGC GTCCAACTTT
CCATTGGCGT TTTCCACCGC CGGTGGCGAT ACCGCGTCTG CACTGGCTGC GGGCTGCGCA
GTTATCGTCA AGGGCCATCC ATCCCACCCC GGCACCAGCG AATTGGTGGC CCGGGCGATG
GCAAGAGCCA TTGATCTGAC CGGTATGCCA AAGGGGCTCT TTTCACTCAT TCAGGGAAGT
GAACCGGCGC TGTCGGTGGC ACTCGTTGAG CATCCACTCG TGAAGGCGGT TGGCTTTACC
GGCTCGCTTA AAGTGGGACG CCTCCTTGCT GACCGCTGCG CATTGCGCCC CGAGCCCATC
CCCTTTTATG GTGAACTGGG TTCCGTGAAT CCTCAGCTGC TGCTGCCCGG AAAACTCGCG
AGAGATGCAG CGGTCCTGGC CGAGGCTCAG GTCAATTCCA TGATGATGGG CCATGGGCAG
TTTTGTACAA GCCCGGGACT GGTCATTGCC ATCAAAGGCC CGGGTCTGGA GAGCTATCTT
GCGGCCTTAT CTGACATAGC CAGCCGCCAA AATGCCGCTG CCATGCTGAG TGCCGGAATA
TGCCAAGCTT TTAATCAGGA CGTCAGTATC CTGGTGCCCA GGGTAAATGT GATTGCCCAG
GGGCAAGCGG CCGAGGCGGC GCACCACAGC CGGCCCCTGA TTGCCAGCAT CGAGGCAAGC
GCCTTGTTTG GGCAACCCGA ACTGCTGGAG GAAATCTTTG GCCCCTTTGC TCTGGTGGCG
ATATGTGATT CAAAGGAGGA GATGTTTGAA CTGGTGAAAC GCCTCCCCGG TCAGCTGACC
GGAAGCATCC ACGGACTGGA AACAGAAGTC GCAGACTTCG GTGACATAAT TGACAGACTG
GCGTTTAAAG TAGGCCGCAT CATGTTCAAT CAAATGCCAA CCGGGGTTGA AGTGGCCAGA
GCCATGAACC ACGGCGGTCC CTACCCTGCC AGTACCGACG GCCGCTCCAC ATCGGTGGGC
GCCGAAGCCA TGAAGCGCTT TATGCGTCCT ATTTGCTACC AAAATATGCC TGAAACGCTG
TTGCCCAATG AGCTTAAAGC GTCATCAAGG CGGTTGATGA TGTTCTAA
 
Protein sequence
MTTDLCGRHF IAHEWHQSEA SFTRFNPSTN SVLPGAFSQG TVVEVEAAAI AADAAFWEFQ 
QTSADQKAKL LETMAKEIEQ DGDAIVACAM LESGLPEARL KGELGRTAGQ LRLFASVLRE
PYSPLLMDKA NPDRQPLPKP ELKLGQLPLG VVAVFGASNF PLAFSTAGGD TASALAAGCA
VIVKGHPSHP GTSELVARAM ARAIDLTGMP KGLFSLIQGS EPALSVALVE HPLVKAVGFT
GSLKVGRLLA DRCALRPEPI PFYGELGSVN PQLLLPGKLA RDAAVLAEAQ VNSMMMGHGQ
FCTSPGLVIA IKGPGLESYL AALSDIASRQ NAAAMLSAGI CQAFNQDVSI LVPRVNVIAQ
GQAAEAAHHS RPLIASIEAS ALFGQPELLE EIFGPFALVA ICDSKEEMFE LVKRLPGQLT
GSIHGLETEV ADFGDIIDRL AFKVGRIMFN QMPTGVEVAR AMNHGGPYPA STDGRSTSVG
AEAMKRFMRP ICYQNMPETL LPNELKASSR RLMMF