| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1511 |
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| Symbol | |
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| ID | 4603763 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1834784 |
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| End bp | 1836034 |
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| Gene Length | 1251 bp |
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| Protein Length | 416 aa |
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| Translation table | 11 |
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| GC content | 53% |
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| IMG OID | 639780861 |
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| Product | response regulator receiver protein |
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| Protein accession | YP_927388 |
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| Protein GI | 119774648 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG3706] Response regulator containing a CheY-like receiver domain and a GGDEF domain |
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| TIGRFAM ID | [TIGR00254] diguanylate cyclase (GGDEF) domain |
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 12 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGCGGATTC TGGTGGTAGA AGACAGCAGC GTGGCAGCAC GCATCCTCAA ACATATGCTG
ACCCATCAGC TCGAGTGCAG CATTGATGTT GCGCCGGACT TGGCCAGCGC CGCGGCCCTG
CTGGCCAAGC ACGACTATTT TGTGGCGATA TGCGATCTCA ACCTGCCCGA TGCTCCCGGC
GGGGAGAGTG TCGAGCTGGT GCTTGGCAAT CAGACGCCCT GTATCGTGCT GACCGGCAGC
CTGGATGCAC AGCAGCGCCG CCGTTTACTG CAAATGGGCA TAGTGGATTA TGTCTACAAG
GAAAACCGTT ACAGTTACGA GTACGTAGTC AAACTTATCG CCACCCTTGC TCGCAACCGC
CACACCAAGG TGTTGGTGGC CGACGATTCG GCCCTCAGTC GCAAATTTGT CCGTAATCTG
TTGGAGCTGC ATCTTTTTGA AGTGATCGAA GCCGAAAACG GCGCCAGGGC ATTGGAGCTG
CTTGACGCCG TGTCCGGCAT TCGCCTGCTT ATTGCCGATT ACAATATGCC GGGTATCGAT
GGATTTGAAC TTATCTTAAG AGCCCGTGAA AAATTCAGCC GTGAGGAAAT GGCGATTATC
GGTCTTTCAA ACGACACTGA CGAAACCCTC ACGGCACGTT TTATTAAAAA CGGTGCCAAT
GACTTTTTGC AAAAGCCCTT TGTACACGAA GAGTTTCACT GCCGCGTGAG CAACACCCTT
GAATCCCTTG AGATGGTCAG GCAGCTCTGG GAGCAGGCCA ATTTGGATTA CCTTACCTCG
GTGTATAACC GCCGTTTTTT CTTCAATCGC TTCAGTCAGC AGGTGCCTGT ACTGGGGCAG
CAGGGAGCGA GTTTTTCGCT CGCTGTGCTG GATATCGATT TTTTTAAAGA CGTCAATGAC
AAGCATGGCC ATGATGTCGG CGATTTTGTA CTCACGGAGT TTGCTTCGCG CTTGAAACAG
TCGCTTGGGC AGCATTTTAC CGTTGCCCGT TTTGGTGGCG AGGAGTTTGT TGTGGCCTTG
AAAGGACTGG ATGGCAAGCG CGCTCTGGCG CTGATGGAAG GTTTTCGTGA ACGCCTGGCG
ATGGAGCCAT TTGTGTTTGG CGAACTCGAA CTGAGATTGA CCGCAAGCAT TGGCATTGTA
GCGCTCGGGC ATGACAGCGA AGAGACTCTG GACAGCCTGA TAAAACAAGC CGATGTGGCA
CTCTATCAGG CCAAAACAAA CGGGCGTAAT CGCTGCGTGC TGGCCGAGTA A
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| Protein sequence | MRILVVEDSS VAARILKHML THQLECSIDV APDLASAAAL LAKHDYFVAI CDLNLPDAPG
GESVELVLGN QTPCIVLTGS LDAQQRRRLL QMGIVDYVYK ENRYSYEYVV KLIATLARNR
HTKVLVADDS ALSRKFVRNL LELHLFEVIE AENGARALEL LDAVSGIRLL IADYNMPGID
GFELILRARE KFSREEMAII GLSNDTDETL TARFIKNGAN DFLQKPFVHE EFHCRVSNTL
ESLEMVRQLW EQANLDYLTS VYNRRFFFNR FSQQVPVLGQ QGASFSLAVL DIDFFKDVND
KHGHDVGDFV LTEFASRLKQ SLGQHFTVAR FGGEEFVVAL KGLDGKRALA LMEGFRERLA
MEPFVFGELE LRLTASIGIV ALGHDSEETL DSLIKQADVA LYQAKTNGRN RCVLAE
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