| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1487 |
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| Symbol | |
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| ID | 4603739 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1799927 |
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| End bp | 1802383 |
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| Gene Length | 2457 bp |
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| Protein Length | 818 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 639780837 |
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| Product | ABC transporter, permease, putative |
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| Protein accession | YP_927364 |
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| Protein GI | 119774624 |
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| COG category | [Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG3127] Predicted ABC-type transport system involved in lysophospholipase L1 biosynthesis, permease component |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 14 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCTGAAGT CTCTGGCATT GCGACTCTTC TGGCGCGAGC TCAGACAGGG GCAGTTGTTG
CTTATCCTGT TTGCCATTTC CCTGGCCGTA CTCGCTGTTA CAGGCCTTGC CCGGGTGAGT
GAAAGGCTGC AGGTGGCCAT CAGCGGGGAA GCGGCCAAAT TTACCGCCGC CGACAGGGTG
GTGGACTCCC CCCAACCACT CAGCACTGAG CTGCTGGCCA GGATAGACGC CATTGGCCTT
GCGCGTGCCG ACAGCATGTT ATTCAACTCC ATGGCCTGGT CGGGAGATGC CTTTCAATTG
GTCACAGTGC GCGCGGTGGG CAACAGCTAC CCGCTTAAAG GCGAAATTGA GCTGGCGGAT
GGCCCGACGG GGTTGCTGCC CGAGGCAGGC ACCCTCTGGT ACGAAGGGCG GCTGGCGGGC
CTGATTGGCC AGTCAGAGTC GCTGGAACTG GGTGACAGGC AGTTTAATCT GACCAAAGAA
ATCAAACGCT TACCCGATGC GGGCTTTAAT CCCTTTGCTT CGTCACCTGT GGTATTGATG
GGCTTGGATG ATGTGGCCTC CACCGGTATT GTCGGTCCCG GCAGCCGGGT CACTTACCTG
TATCAGTTCA GCGGTGACAG CGCGCAATTG GCCGAGTTGG ATGAGTTGCT CAAGGCCGAG
CTCACCAGCT CTCAGCGCCT TCGGGATGTA AAGTCCGGTG ATTCCCCCAT CGCCAGCGCC
GTTGCCCGCG CCGAGCGCTT CCTGTTATTG GCAAGTTTGC TGGGCATAGC GCTTGCCTGC
GCCGCCATAG GTATCGCCGC GCAGCGATAC TGCCAGCGTC ACTACGACGT GGTGGCCATG
TTCAAAACCT TTGGCGCTTC AGCGAAGGAA ATCCGCACCC TGTTTGCGCT GCATCTGTCT
TTGGTGACCG CGTTTGGCGT ATTGGTGGGC ATTCTTGGGG GGCTTGGGCT GGATGCGGTG
ATAGCCCGGT TCCTGCCGCC AGAGCTTACG GCCTATGAGG CGCCGCTGCT CAGACCTGTG
CTGCTTGGCG TACTGACAGG CAGCATCAGT GCGCTGATGT TCTCGGCCTA TCCGCTGCTG
CGTCTCCTCG CTATTCCGCC GCTTCGGGTG CTCCAGCGTG AACTCACCGG GCGAAGTGCC
GGCGTCTGGC TGCATGCGGC GCTGAGCCTC AGTGCCATGG CGCTGCTGGG ATATGCCTAT
TCCCGCTCAT GGCAGCTGAC CGGCGCTGTG GTGCTTGGCG CTTTGCTGCT GGGATTGATC
CTGTTTGCCC TTGGCTTTGT GATGATCCGC CTTGGCCATG GCGCCGGGCT TAAAACCACC
AATCCGCTGC AGTTGGCGTT GGCGGGGCTC AGGCGCCGTG CGGCACAAAA CTCGGTGCAG
CTGGTGGGCT TTTCTACCGC GCTGGTGCTG CTGCTGACCA TATTTGCATT GCGTCAGGAC
TTGTTGGATG ACTGGCAGAA GCAACTCCCG GAGGGGGCGC CCAACTTCTT TTTGGTGAAC
ATCAGTCCGG AGGATGAAGC GCCCATGGCC GAGTTCCTGG CCGAAAATCA CATCGAACGC
ACCGATATTT ATCCGGTTAT CCGTGGCAGG CTTTCTGCCA TCAACGGTGA GGCGCTCATC
AGTGAACGCC AGTCCGAAGA AGGAGCCACC GGGCGGGTGG GGATTGGCCG CGAGCTGAAC
ATGACCTGGC GAGATAGCCT GCCACCCAAT AACCGCCTGA TTGCGGGCGA GTTTGATAAT
GTCGCGGACG GGGTTTCGGT GGAGACCAAG GTTGCCGAGC GTCTGGGGTT GAAGCTTGGG
GACAGTCTCA GTTTCGTTAT CGATAACCAG ACTCTGGATG TGCGGGTGAC CAGCTTGCGG
GAAGTACGCT GGGAGACCAT GCAGCCCAAT TTCTTTATGA TTTTTTCAAA AGAAGCCCTG
GCACCCTTTG CCTACACATC GATGCTGAGT TTTCACCTCG ATGAGGCCAA ACGGCCCCTG
GTCGTGTCGC TGATTAAGCA ATTCCCTACC GTGTCCGTGA TAGACGTAGG CGCCATGGTG
GCCCAGCTCA GAAGCATAGT ATCCCAGGTG TCGCTGGCAC TTGGGGTCGT GCTGGCACTG
GTGATTGCAT CCAGCAGTCT GGTGCTGTGG GCGCAGACCG AAGCGGGCAT GTCGGTAAGA
CGACGTGAGC TTGCTGTGCT GCGCACCTTT GGCGCCGGTG GGCGCTTATT GCGGCTGGCA
ACCACGCTGG AATTTGCAGT GCTGGGCGCC GTGGCGGGGA TTGTGGCCGT GGTTGTCACA
GAAGCCGTGC TCTATCTGCT TAAAACCTGG GTGTTTGAAC TTGGCGTGAA CTGGCATCTG
CAGTGGTGGC TGCAGGCCCC ACTGCTGGGG GCCGCACTGG TTGCCGTGCT CGGTTACTGG
CGCTGCCGGG AGCTGTTGTC CCAAAGCTGC CTGTCGCTGC TTCGCACCGA GACTTGA
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| Protein sequence | MLKSLALRLF WRELRQGQLL LILFAISLAV LAVTGLARVS ERLQVAISGE AAKFTAADRV
VDSPQPLSTE LLARIDAIGL ARADSMLFNS MAWSGDAFQL VTVRAVGNSY PLKGEIELAD
GPTGLLPEAG TLWYEGRLAG LIGQSESLEL GDRQFNLTKE IKRLPDAGFN PFASSPVVLM
GLDDVASTGI VGPGSRVTYL YQFSGDSAQL AELDELLKAE LTSSQRLRDV KSGDSPIASA
VARAERFLLL ASLLGIALAC AAIGIAAQRY CQRHYDVVAM FKTFGASAKE IRTLFALHLS
LVTAFGVLVG ILGGLGLDAV IARFLPPELT AYEAPLLRPV LLGVLTGSIS ALMFSAYPLL
RLLAIPPLRV LQRELTGRSA GVWLHAALSL SAMALLGYAY SRSWQLTGAV VLGALLLGLI
LFALGFVMIR LGHGAGLKTT NPLQLALAGL RRRAAQNSVQ LVGFSTALVL LLTIFALRQD
LLDDWQKQLP EGAPNFFLVN ISPEDEAPMA EFLAENHIER TDIYPVIRGR LSAINGEALI
SERQSEEGAT GRVGIGRELN MTWRDSLPPN NRLIAGEFDN VADGVSVETK VAERLGLKLG
DSLSFVIDNQ TLDVRVTSLR EVRWETMQPN FFMIFSKEAL APFAYTSMLS FHLDEAKRPL
VVSLIKQFPT VSVIDVGAMV AQLRSIVSQV SLALGVVLAL VIASSSLVLW AQTEAGMSVR
RRELAVLRTF GAGGRLLRLA TTLEFAVLGA VAGIVAVVVT EAVLYLLKTW VFELGVNWHL
QWWLQAPLLG AALVAVLGYW RCRELLSQSC LSLLRTET
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