Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1475 |
Symbol | |
ID | 4603727 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 1784250 |
End bp | 1785296 |
Gene Length | 1047 bp |
Protein Length | 348 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639780825 |
Product | hypothetical protein |
Protein accession | YP_927352 |
Protein GI | 119774612 |
COG category | [S] Function unknown |
COG ID | [COG4984] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGTGGATA AATCGCAGCT ATGGCAGGGG CTTGTGGAAA AAGGCCTGAC AACCAGGGAT ACCTTGCCAG AGAATCATCA CGGACCTCTG TGGTTAACCC TGCTGACAGG CTTATCCGGC TGGATAGCTG CCTTCTTTTT TCTGGGGTTC TCTGTGCTCC TTATTGAAGA GTTTTCCCGG TTTGATGACA AGATGGCATT GGCAGTGGGG CTGATTTACG CTGCCATCGC CAGGGGCATT TACAGTCAGG GCAAGGGAGT GGAGTTTCTC ACACAACTTG GTTTTGCCAT TAACCTTGCC GCCATGCTCG CGACCCTGTG GGGGCTTGCC CATTACTTTG ACAATCCAGG CGTTGTGTAT TGGTTGTCGG GTGCTTGCTT GCTGGCTTTG AACGGCTGGT TTTGCCGTTA TGGTGTCGAT GGGCAGCTTT CGGTATTGGG TGCTCTGGTG CTGTTTGCCC AGGCTTTCGA CAGCGTTAAG TGTGTGGCTT GGGTGTTACC GGCGATGTTA CTTGGGCTGG GGTTGGTCAA TGGCCTTTGG CAGCCCTGGA TACGCCTGCA GCTTTGCGGG TTGCACCTGT TCGCGCGGCG ATTATCCCAT GGGATGGTGT TTATGGTGCT CGCGTTACCT CTGGTGCTGG ATGAGCAGCT GCTGTATTTG GGCGCTGGCT CGATATTTGC GGGGCAGGAC GGATGGGCAT TCAGCATCGC CAAGGCAGCG AGTTACCTGA CGTTCATTAT CTTTTGTGCG GCCATACTCT GGCGGCTCAA GGTGCCGGTG TTGGGCCTTG TGATGGGTAC ACTGGGTTTA ACACTGCTTT TCAGCCAGTT TTCCGGACTG GCCCTTGCCA TGGTGCTGTG GCTCTTTGGC TGGCAGCGCC GGGAGCGGCT TTATGTGCTG CTGGCCTCTA TGGCGGCGCT CCTCTATTTC AGCGCTTACT ACTATGAGTT GTCGCTGACC TTGCTGCATA AATCCATGGT GCTGATGGGG CTTGGTATTT TACTGCTGTT AGCGGGATTT GTTCTTTCTC GCAGGGAGGC ATCATGA
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Protein sequence | MVDKSQLWQG LVEKGLTTRD TLPENHHGPL WLTLLTGLSG WIAAFFFLGF SVLLIEEFSR FDDKMALAVG LIYAAIARGI YSQGKGVEFL TQLGFAINLA AMLATLWGLA HYFDNPGVVY WLSGACLLAL NGWFCRYGVD GQLSVLGALV LFAQAFDSVK CVAWVLPAML LGLGLVNGLW QPWIRLQLCG LHLFARRLSH GMVFMVLALP LVLDEQLLYL GAGSIFAGQD GWAFSIAKAA SYLTFIIFCA AILWRLKVPV LGLVMGTLGL TLLFSQFSGL ALAMVLWLFG WQRRERLYVL LASMAALLYF SAYYYELSLT LLHKSMVLMG LGILLLLAGF VLSRREAS
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