| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1461 |
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| Symbol | |
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| ID | 4603713 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1770080 |
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| End bp | 1770703 |
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| Gene Length | 624 bp |
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| Protein Length | 207 aa |
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| Translation table | 11 |
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| GC content | 51% |
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| IMG OID | 639780811 |
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| Product | SM-20 domain-containing protein |
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| Protein accession | YP_927338 |
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| Protein GI | 119774598 |
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| COG category | [O] Posttranslational modification, protein turnover, chaperones |
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| COG ID | [COG3751] Predicted proline hydroxylase |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.348442 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.841755 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGATTTGTG AGTTCAGTGA GTCTGTGCTC GATGGCATCG CAGATGCGCT TGTCGATCGC
GGTTATATTT GTGTCGATAA TTTATTCGAA CCCGAGGTTG TTGTCAGATT AAGGGACAAG
GTGTTTACCA AGGCCGACGA AACTTTTAAA CCCGCCAGTA TTGGCAGGGG CCAGGAGCAG
CACCGCAACA CCGACATTCG CCGCGACAGC ATTCGTTGGC TTGAGCCCCA GTGCGCGGTG
GACAATCAGT ACTTATCACT GATGGAGTCG TTAAAAAATG GCCTGAACCG TCGCTTGTTT
ATGGGGCTGT TTGACTATGA AAGTCACTAC GCGCTCTACC GTCCCGGTGC TTTCTATAAA
AAGCACGTTG ATGCCCTGAA AGGCAGTCAG AATCGTATTT TAACGACGGT GTTTTTTATG
AATCCCGAGT GGCAGCCAGA TCACGGCGGC GTGCTTAAAC TCTACGAAGA AGACGATAGT
TTGATTGAAG AACTGGCACC CTTGATGGGG CGGTTGGTTA TTTTCCTGTC GGAGCGCTTT
CCCCACGAAG TGATGCCCAC GACAGTCGAC AGAGCCAGCA TTGCCGGCTG GTTCAGAGTT
GCAGGCAGTC AGCACGGCTT TTAA
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| Protein sequence | MICEFSESVL DGIADALVDR GYICVDNLFE PEVVVRLRDK VFTKADETFK PASIGRGQEQ
HRNTDIRRDS IRWLEPQCAV DNQYLSLMES LKNGLNRRLF MGLFDYESHY ALYRPGAFYK
KHVDALKGSQ NRILTTVFFM NPEWQPDHGG VLKLYEEDDS LIEELAPLMG RLVIFLSERF
PHEVMPTTVD RASIAGWFRV AGSQHGF
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