Gene Sama_1385 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_1385 
Symbol 
ID4603637 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1676878 
End bp1677390 
Gene Length513 bp 
Protein Length170 aa 
Translation table11 
GC content55% 
IMG OID639780735 
Producthypothetical protein 
Protein accessionYP_927262 
Protein GI119774522 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.0250374 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGATCCGGC TGGAAAAGAT GACTGCGTCA ACTCGCCCCC TCGCCGAAGC GCTTGAAGTG 
GCACCGGAAC AATTGCGCTT TGTAGGTACC ATGGACGAAA TCCTTGCCAC CGCTGGTGGC
GCCATAGTGC CTGTGTTGGT GTGGCACAGA GCTTCCTCTG CTACGACTGA TATCGCCGAC
CTAAACAGCG GCGAACATCT GGTCGGCTTT TTTCTGCTGG ACAAGGAATA CAGCTGCGAG
CATGACTTCG CCGAGGCCTC CGACTTGGGT TTCAGGGCAT TTCTGATTGA TGTGCACCAT
CAGGGTAAAG GCCTTGCCAG GGCCGTGATG CAGGCGCTGC CACAATTTGT AAAAGTGCGC
TATCCGCAGT TCCGCCGCCT GGTGCTGACA GTCAATCTTA AAAATACCCC GGCGCAGGAT
CTCTATCTAA AAAACGGTTT TAGCGACAGC GAAAACCAGT ATTTGGGCGG CAGCGCCGGG
CCTCAGCACA TCCTGTACTT GAAGCTCGAC TGA
 
Protein sequence
MIRLEKMTAS TRPLAEALEV APEQLRFVGT MDEILATAGG AIVPVLVWHR ASSATTDIAD 
LNSGEHLVGF FLLDKEYSCE HDFAEASDLG FRAFLIDVHH QGKGLARAVM QALPQFVKVR
YPQFRRLVLT VNLKNTPAQD LYLKNGFSDS ENQYLGGSAG PQHILYLKLD