Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_1134 |
Symbol | purU |
ID | 4603386 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 1383259 |
End bp | 1384104 |
Gene Length | 846 bp |
Protein Length | 281 aa |
Translation table | 11 |
GC content | 51% |
IMG OID | 639780481 |
Product | formyltetrahydrofolate deformylase |
Protein accession | YP_927011 |
Protein GI | 119774271 |
COG category | [F] Nucleotide transport and metabolism |
COG ID | [COG0788] Formyltetrahydrofolate hydrolase |
TIGRFAM ID | [TIGR00655] formyltetrahydrofolate deformylase |
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Plasmid Coverage information |
Num covering plasmid clones | 16 |
Plasmid unclonability p-value | 0.409656 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 10 |
Fosmid unclonability p-value | 0.540867 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGTTGCAAC CATCAGATCG CCGGGTATTG ATAACCGATT GTGCCGATGC CAAGGGCCTT ATCGCCAAAA TCACAGGTGT GTGTTTTGAA AATGGCCTCA ACATCATCAA AAACGACGAG TTTGTTGATA ATACCGAGGG GCGCTTTTTT ATGCGTACCG AGCTGGAAGG CCTGGTAGAT GAGGCGGGTT TGCTCGGCGC GCTCGATGAG GTGCTGCCCG CACACCATCA CACCAACCTT AAACCGGCCG GGCGTAAAAG AGTGGTGGTG TTGGTGACCA AGGAAGCTCA CTGTCTGGGT GATTTATTGA TGAAGGCTTA TTATGGCGCT CTGGATGTGG ATATTGCTGC AGTCGTGGGT AATTACGATA AACTCAGGCC ACTCACGGAA AAGTTTGATA TTCCTTTTCA TTATGTCAGC CACGAAGGGC TGGACAGACA TCAGCATGAA GCGGCGCTGG CTGAGGTCAT TGCGCCCTAT GGGCCCGATT ATCTGGTGCT GGCCAAGTTT ATGCGCATTC TGACACCGGA ATTTGTTGCG CGATATCCCA ATCGCATCAT CAATATTCAT CACTCGTTTT TGCCAGCCTT TATTGGTGCC AATCCCTACC GACAGGCTTG GGAGCGCGGC GTGAAGATAA TCGGGGCTAC GGCTCACTTT GTGAATAATT GCCTGGATGA AGGTCCTATC ATCAAACAGG ATGTCATTCA CGTTGATCAC AATTACAGTG CAGCAGAGAT GGCAAGGGCT GGACGGGATG TGGAGAAATC GGTGCTGAGC CGGGCGCTGG GTTTGGTACT GGCCGATAAG GTCGTGGTTT ACGGTAACAA GACCGTGGTG TTTTAA
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Protein sequence | MLQPSDRRVL ITDCADAKGL IAKITGVCFE NGLNIIKNDE FVDNTEGRFF MRTELEGLVD EAGLLGALDE VLPAHHHTNL KPAGRKRVVV LVTKEAHCLG DLLMKAYYGA LDVDIAAVVG NYDKLRPLTE KFDIPFHYVS HEGLDRHQHE AALAEVIAPY GPDYLVLAKF MRILTPEFVA RYPNRIINIH HSFLPAFIGA NPYRQAWERG VKIIGATAHF VNNCLDEGPI IKQDVIHVDH NYSAAEMARA GRDVEKSVLS RALGLVLADK VVVYGNKTVV F
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