| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1111 |
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| Symbol | |
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| ID | 4603363 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1347037 |
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| End bp | 1348848 |
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| Gene Length | 1812 bp |
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| Protein Length | 603 aa |
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| Translation table | 11 |
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| GC content | 40% |
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| IMG OID | 639780458 |
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| Product | ATP-dependent OLD family endonuclease |
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| Protein accession | YP_926988 |
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| Protein GI | 119774248 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG3593] Predicted ATP-dependent endonuclease of the OLD family |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 19 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGAAATGG AACTTTCAAA AATAAAGATA TCAAACTTTA GGTCAATAGA CAGAATAGAA
TTCACTCTGA GGAATTATAC ATCGTTGATC GGGCCTAATA ATGCTGGTAA ATCAACAGTG
TTGAGTGCTA TAGATTGTTT TTTGAATCAG ATTAAACCTC AGCTATCTGA TTGGAGAAAT
CATAATTATG ACGAGCCTGT GATAATTGAG TGCTTATTTA CAAATTTACA GCCATGGGAG
TCTACATGTC CTGGTGTTGC TGGCATTGTT CAAAATAATG AAATTCACTT GCGTTTAGTG
GCGTCGGCAG ATGTTGCCAA TTCTTCAGTT AATGTTGAGT ATGAAGCTTA TATTAGAGAA
GAGCAAATTG AAGGTTGGTC CTCTGGATGG AGAGATTTAT CTCAGACCAT CAAAGAAATT
GCAAGCGAAC GAGGTTTCAA CGGCACTAGC TGGAAAACAG TATCAAACAG AGAAGTTATA
AAGCAGCATC TAAGGGAAAA TCATCCAGAA CTGATTGCTG CGGGTGATTA TATCTGGACT
AGTGAAGGTA TTAGCATTAA ACCCGCTTTA CAACAAGCTT TACCCAAGTG TGTGGTTATA
CCGGCGGTTA GCAAGATTGG AGATGACCTG AAAACCACTG GGAAATCGCC ATTTAATCAA
CTTTTATCTT CCGTTGTTAT GCCAGCAGTC GCGCGTTCAG AAGAATTTAG AGGTTTACAA
TCAGCAATTC AGTTATTAAC TGATAAAATG CGGGGGCAGT CTGAAGATGA GTTCGAAGAG
ATTAGGCGTA TAACCGATTT ATTGACCGAA CGTTTGTCAA GTATATTGGA TGCCGAAGTT
ATAATGAGTC TTAATTCACC AGACTTTGAG AAGTTTATAA ACTCTGGCGC AACACTTTTA
GTAAATGATG GGCATACAAC ATCCCCTGAT AATCAGGGAA GTGGTGCACA ACGAGCTCTA
ACATTTGCAC TGCTAGAAAC AATAACGAAA ATGGAAATTG CTCAAGAAGG TGAACAGGTT
AAGTCAACCT TGTTACTGTT TGAAGAGCCG GAGTTGTATA TTCATCCTCA TTTAATGAGA
AAGCTGAAAT CCATACTTGA GACTATTGGC GCCAGTAATC ATTGGCAAGT GATTTCAACA
ACTCACTCAC CGTTTCTGAT TGATGTAGCT TCAGACCCTA TGTCGTTAGT CCTGGTCTCA
AGAAATGGTA GGGGAAGCCC TACAGAATTA AAGCAGTTGC AATCTGATCC ATTTTCCAAT
GTTGAAAATG GAGATAGAGA GCGACAAGCC TTAAGAGCGA CCTTAGATTT TCATCCAACA
GTATGTGAAG CGTTTTTTGC TAGTCGTGTG GTTTTAGTTG AAGGCGATAC AGAGGTGGCT
ATCTTCAAGA GAGCATATGA GATTCTTGAT GCACTTGAGA TGGATACAAG CAATGTAGAG
AACACCACAA TAGTTTCTTG CGGAGGTAAG TGGACAATCC CCGCAATTGC AAGGTTACTA
GCTAACTTTG AGGTGCCATT TAGAATTGTT CATGATTTGG ATCGAAAAGG TCGCACAGAC
GATGAGTTAC AAGTTGCAAC GGGTATTGAT CCTTATCGAG CCAATGCAAA AATTGACAGC
GCAGCACCGA ATGTAGATAA ATTTTTGGTC GAAGATACCC TAGAGGATTT ACTATGGCCT
AATTCTCGTT TATCTGGAAA AGACAAGCCT TATCAAGCAT GGAATAGAAT TAGCGACTTA
CTTGGAAATG TTGGAGAGCT TCGCGATTTA CATGACTTTG AGAGAATGCT TCGCTTTGTG
TATGAATGGT AA
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| Protein sequence | MEMELSKIKI SNFRSIDRIE FTLRNYTSLI GPNNAGKSTV LSAIDCFLNQ IKPQLSDWRN
HNYDEPVIIE CLFTNLQPWE STCPGVAGIV QNNEIHLRLV ASADVANSSV NVEYEAYIRE
EQIEGWSSGW RDLSQTIKEI ASERGFNGTS WKTVSNREVI KQHLRENHPE LIAAGDYIWT
SEGISIKPAL QQALPKCVVI PAVSKIGDDL KTTGKSPFNQ LLSSVVMPAV ARSEEFRGLQ
SAIQLLTDKM RGQSEDEFEE IRRITDLLTE RLSSILDAEV IMSLNSPDFE KFINSGATLL
VNDGHTTSPD NQGSGAQRAL TFALLETITK MEIAQEGEQV KSTLLLFEEP ELYIHPHLMR
KLKSILETIG ASNHWQVIST THSPFLIDVA SDPMSLVLVS RNGRGSPTEL KQLQSDPFSN
VENGDRERQA LRATLDFHPT VCEAFFASRV VLVEGDTEVA IFKRAYEILD ALEMDTSNVE
NTTIVSCGGK WTIPAIARLL ANFEVPFRIV HDLDRKGRTD DELQVATGID PYRANAKIDS
AAPNVDKFLV EDTLEDLLWP NSRLSGKDKP YQAWNRISDL LGNVGELRDL HDFERMLRFV
YEW
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