| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1089 |
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| Symbol | |
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| ID | 4603341 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 1316410 |
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| End bp | 1316982 |
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| Gene Length | 573 bp |
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| Protein Length | 190 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639780436 |
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| Product | TetR family transcriptional regulator |
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| Protein accession | YP_926966 |
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| Protein GI | 119774226 |
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| COG category | [K] Transcription |
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| COG ID | [COG1309] Transcriptional regulator |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 32 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.631868 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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| |
Sequence |
| Gene sequence | ATGGCGCGAA GTTGTAATTT TTGCAAAGAG GAAAAGCTGG AACAGGCCAT GAACCTGTTT
TGGCAAAAAG GCTACGAGGG CACCTCGGTG GCCGATCTGG TGGAGCATCT GGGGATTAAT
CGTTTCAGCC TGTACAACAG TTTTGGCGAT AAGCTGACGT TGTACCGTGA TGCGCTGCGC
CGTTACCTCT ACACCCGCGG CCTGACCGGA CTTGGGCCAC TGCAAGCCGA CGATGCCGAC
ATGGACGCGC TGATGAATTT GGTGGAAGAA TTTGCCGCCA AGCAAAAAGA TCAACAGTTT
GGATGTTTTA TGCAAAACGC CCTGCTGGAG CGCTGTGTGG AGGATGAAGA GGTGAAGCGT
CTTGGCAATG AGCTGTTTGA GGGGCTGGAG CAGGCGTTTG CCAAGGTGCT CGCCCGCTAC
CAGACCAGGG AGCGCGCCGC CGAGCTGGCG GCCTTTCTGG TGATGCAATT GCAGGGCATC
CGGGTGCTGG GCAAGTCCGG ACAGTTTGCA CTGCTCGATG CGGCCATGGT GGTGCTCAGA
GGCGAAATCC AGCGCTGGAA AAGCCCCATT TGA
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| Protein sequence | MARSCNFCKE EKLEQAMNLF WQKGYEGTSV ADLVEHLGIN RFSLYNSFGD KLTLYRDALR
RYLYTRGLTG LGPLQADDAD MDALMNLVEE FAAKQKDQQF GCFMQNALLE RCVEDEEVKR
LGNELFEGLE QAFAKVLARY QTRERAAELA AFLVMQLQGI RVLGKSGQFA LLDAAMVVLR
GEIQRWKSPI
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