| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1027 |
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| Symbol | |
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| ID | 4603279 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1242787 |
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| End bp | 1243734 |
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| Gene Length | 948 bp |
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| Protein Length | 315 aa |
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| Translation table | 11 |
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| GC content | 57% |
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| IMG OID | 639780366 |
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| Product | transporter, putative |
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| Protein accession | YP_926904 |
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| Protein GI | 119774164 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG0679] Predicted permeases |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 27 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 14 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGTTCAACC TCCTCATTCC GCTGCTCGCT GTTGTTGCCG TGATGATTGC GGGCGCTGCC
AGCTCCAGAC TCCTTCCGGG CTGGTTAGAA CGCTTTCTCA ACCAATACGT GTACTACCTT
GCATTTCCGG CCATCCTGTA TGTGAGCTTG GCCAAAACGC CCATTGAACA AATTCTCAAC
CCCGGATTTG TGCTGGGTTA TCTGCTTGCC ATGGTGGTGA CCTATGTATT GGTGCAGCTA
TGGTCACTGA AGCATGAACA GGGACAACCC CGTCCGGCGA GTCTGCGTGC CCTCTCGGCC
ACCTTCGGCA ACACAGCCTT TATCGGTATT CCCGTGCTGG CGATGCTGTT TCCGGATAAT
CCGCAGGCGC TGATGGCTGC CGCGCTGGCA AGCCTTTTAT CCGTCTTGAT GTTTGCCGTT
ACCGTGGTGC AATTAAGACT TGCCAGCCAA CCACTGACTG GCATTGCTCG ATTAAGCCTG
GCGCTGCGGG TTGTGAGCAG GAACCCTGTG GTCATCGGCT GCGCTCTCGG GGTACTGGCG
TCGGCGATGC AGTTTTCACT GCCCCCGATA CTGGAACCCC TGGTGACATG GATAGGTAAA
AGTTCCAGCC CCTGCGCGCT TTTTGCCATC GGCATAGCGC TGGCCCGTTC CATGCGAGAG
CCTGAACACA GTCGAGTGGG CGTGCCCTTC TGGCACGTGA ATCTGGCGAA ACTGGCTTTG
CAGCCGCTCC TGGTATGGCT ACTCTTCAGT TGGTTTGGGG TGGACACGCA GCTGACCGTG
ATGGGGGTAC TGCTTTCCGC CATGCCCACT GCCGCCAGCG TTTATCTGCT GGCCTATCAG
GATAAAACCC TGGAAAAACA AATCGCCCGG GGCATAGTGG CAGGCACGCT GCTGACGCTT
TTCAGTCTGC CGCTGCTGAC GATGGGGTTA AACCTGATAA CCCAGTAA
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| Protein sequence | MFNLLIPLLA VVAVMIAGAA SSRLLPGWLE RFLNQYVYYL AFPAILYVSL AKTPIEQILN
PGFVLGYLLA MVVTYVLVQL WSLKHEQGQP RPASLRALSA TFGNTAFIGI PVLAMLFPDN
PQALMAAALA SLLSVLMFAV TVVQLRLASQ PLTGIARLSL ALRVVSRNPV VIGCALGVLA
SAMQFSLPPI LEPLVTWIGK SSSPCALFAI GIALARSMRE PEHSRVGVPF WHVNLAKLAL
QPLLVWLLFS WFGVDTQLTV MGVLLSAMPT AASVYLLAYQ DKTLEKQIAR GIVAGTLLTL
FSLPLLTMGL NLITQ
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