| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_1008 |
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| Symbol | |
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| ID | 4603260 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | - |
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| Start bp | 1219712 |
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| End bp | 1220491 |
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| Gene Length | 780 bp |
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| Protein Length | 259 aa |
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| Translation table | 11 |
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| GC content | 54% |
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| IMG OID | 639780347 |
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| Product | amino acid ABC transporter |
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| Protein accession | YP_926885 |
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| Protein GI | 119774145 |
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| COG category | [E] Amino acid transport and metabolism
[T] Signal transduction mechanisms |
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| COG ID | [COG0834] ABC-type amino acid transport/signal transduction systems, periplasmic component/domain |
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| TIGRFAM ID | |
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| 
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Plasmid Coverage information |
| Num covering plasmid clones | 24 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 19 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAACCGGC CGTGTCTACG CTCAGTAATG TCTATCGTTT TTTTGCTGTT TTCCACCATG
GTCAGCAGTA ACGAAACCAG CATCCGACTC GCCGCCGAAG ACAGCTGGCC TCCTTTTGCC
GATGCCGCCG GTGAAGGGTT ATCTCACCGC CTGATAGCCA AAGCATTCGC CCTCGAAGGT
ATCTATGTTG ACACCCTGGT GGTGCCGTAC AATCGGGGGC TGATCCTCAC CGAACAAGGC
AAGGTGAATG CGGTGTTTAA CGTGGCAATG CAACAAAACA CCCGCGAGCG CTTTTGGTTT
GGTGAAGAGC CCCTGTTTGT TGCTACCGCC TCTTTCTATC AGCTAAGCCG CAATGCCCCC
TTGGCGAAAG ACAAATGGTC TCTTCCGAAA GACACCCGCG TGGGCATAGT CAGGGGCTAT
GAATATGGCG ATGAGTTTGA CAGGCTGCCC AACATGGTGC TGAAAATCGT CGATAACCAG
TATCAGCTGA TTAATCTGCT GCTGACCGAC AAGGTCGATG CCGTGGTGAT GTATGACAGA
GTCGCCGCCC AGTTTCTCTA TACCATGGGG GTCAGCGGTG AAGTGCGTGC CGTAATGGCC
AATCACAGCA GCGAGCTGTT TCTGGCATTC GATAAACATA ATCCTGACTC ACCGGCCCTG
GCTGATGCAC TGGACAAAGG CCTGAGACAA CTTAAGGCCA GCGGCGAATA CCACAGCCTG
ATTGCCGGTG TCACATCCGC CCCAGAGGGT TTGAGAAAAA CTGCCGGCGG GGTAAACTGA
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| Protein sequence | MNRPCLRSVM SIVFLLFSTM VSSNETSIRL AAEDSWPPFA DAAGEGLSHR LIAKAFALEG
IYVDTLVVPY NRGLILTEQG KVNAVFNVAM QQNTRERFWF GEEPLFVATA SFYQLSRNAP
LAKDKWSLPK DTRVGIVRGY EYGDEFDRLP NMVLKIVDNQ YQLINLLLTD KVDAVVMYDR
VAAQFLYTMG VSGEVRAVMA NHSSELFLAF DKHNPDSPAL ADALDKGLRQ LKASGEYHSL
IAGVTSAPEG LRKTAGGVN
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