Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0950 |
Symbol | |
ID | 4603202 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 1150775 |
End bp | 1151347 |
Gene Length | 573 bp |
Protein Length | 190 aa |
Translation table | 11 |
GC content | 50% |
IMG OID | 639780287 |
Product | hypothetical protein |
Protein accession | YP_926827 |
Protein GI | 119774087 |
COG category | [S] Function unknown |
COG ID | [COG2353] Uncharacterized conserved protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 4 |
Plasmid unclonability p-value | 0.0000269923 |
Plasmid hitchhiking | Yes |
Plasmid clonability | hitchhiker |
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Fosmid Coverage information |
Num covering fosmid clones | 9 |
Fosmid unclonability p-value | 0.477847 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGAAAAAGA CTCTACTTTC TGCCCTGTTT GTTACGTCAC TTATCGCTGT GCCAGTCTCG GCTGCAGACT ATGTGATTGA TACTCAGGGA GCACACGCTT CCATCAACTT TAAAGTCAAT CATCTGGGCT ACAGCTTTGT GGTTGGCCGC TTTAACGACT TCGGTGGCGA GTTCAGCTTT GATGGCAAGT CACCTGAAAC TGCCAAAGTA AAGGTGACAG TAAACACCCA GAGTCTGGAC TCCAATCATG CCGAGCGTGA TAAGCATTTA AAGAGTGCCG ACTTTATCAA TGCGGGTAAG TATCCTGAGG CCGTGTTTGA GTCTACATCT GTGAAGGCGG GCAGCGACGG CACTTTGGTT ATCGAAGGTA ACTTTACCCT TAACGGCGTA ACCAAGCCGT TAACCATAGA TGCCGTTGCC ATCGGTGAAG GCAGCGACCC CTGGGGTGGC TACCGCGCGG GCTTTACCGG CAGTACCAGC TTTGCCCTCA AGGATTACAA CATCAACTAT GATTTGGGGC CAGCCTCTAC CCATGTGACC CTGGACCTGG TAGTTGAAGG CATTCGTAAA TAA
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Protein sequence | MKKTLLSALF VTSLIAVPVS AADYVIDTQG AHASINFKVN HLGYSFVVGR FNDFGGEFSF DGKSPETAKV KVTVNTQSLD SNHAERDKHL KSADFINAGK YPEAVFESTS VKAGSDGTLV IEGNFTLNGV TKPLTIDAVA IGEGSDPWGG YRAGFTGSTS FALKDYNINY DLGPASTHVT LDLVVEGIRK
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