Gene Sama_0950 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0950 
Symbol 
ID4603202 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp1150775 
End bp1151347 
Gene Length573 bp 
Protein Length190 aa 
Translation table11 
GC content50% 
IMG OID639780287 
Producthypothetical protein 
Protein accessionYP_926827 
Protein GI119774087 
COG category[S] Function unknown 
COG ID[COG2353] Uncharacterized conserved protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones
Plasmid unclonability p-value0.0000269923 
Plasmid hitchhikingYes 
Plasmid clonabilityhitchhiker 
 

Fosmid Coverage information

Num covering fosmid clones
Fosmid unclonability p-value0.477847 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAAGA CTCTACTTTC TGCCCTGTTT GTTACGTCAC TTATCGCTGT GCCAGTCTCG 
GCTGCAGACT ATGTGATTGA TACTCAGGGA GCACACGCTT CCATCAACTT TAAAGTCAAT
CATCTGGGCT ACAGCTTTGT GGTTGGCCGC TTTAACGACT TCGGTGGCGA GTTCAGCTTT
GATGGCAAGT CACCTGAAAC TGCCAAAGTA AAGGTGACAG TAAACACCCA GAGTCTGGAC
TCCAATCATG CCGAGCGTGA TAAGCATTTA AAGAGTGCCG ACTTTATCAA TGCGGGTAAG
TATCCTGAGG CCGTGTTTGA GTCTACATCT GTGAAGGCGG GCAGCGACGG CACTTTGGTT
ATCGAAGGTA ACTTTACCCT TAACGGCGTA ACCAAGCCGT TAACCATAGA TGCCGTTGCC
ATCGGTGAAG GCAGCGACCC CTGGGGTGGC TACCGCGCGG GCTTTACCGG CAGTACCAGC
TTTGCCCTCA AGGATTACAA CATCAACTAT GATTTGGGGC CAGCCTCTAC CCATGTGACC
CTGGACCTGG TAGTTGAAGG CATTCGTAAA TAA
 
Protein sequence
MKKTLLSALF VTSLIAVPVS AADYVIDTQG AHASINFKVN HLGYSFVVGR FNDFGGEFSF 
DGKSPETAKV KVTVNTQSLD SNHAERDKHL KSADFINAGK YPEAVFESTS VKAGSDGTLV
IEGNFTLNGV TKPLTIDAVA IGEGSDPWGG YRAGFTGSTS FALKDYNINY DLGPASTHVT
LDLVVEGIRK