| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sama_0693 |
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| Symbol | |
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| ID | 4602946 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Shewanella amazonensis SB2B |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008700 |
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| Strand | + |
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| Start bp | 856788 |
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| End bp | 857765 |
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| Gene Length | 978 bp |
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| Protein Length | 325 aa |
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| Translation table | 11 |
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| GC content | 56% |
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| IMG OID | 639780028 |
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| Product | RuBisCo operon transcriptional regulator |
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| Protein accession | YP_926571 |
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| Protein GI | 119773831 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 20 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 15 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGATAACC CCAGACTTAA ACAACTCAGT ATAAGACTGC TGCAGGTCTT CATTACCGTG
GTGCGCCTTG GCAATGTGTC GGCCGCGGCC AGACAGCTGC ATCTCACTCA ACCCACGGTT
TCTCTGCAGT TGAAGAAGAT TGCCGAGCTG GTTGGGGAGC CATTACTGGA AAGCCGGGAT
GGCGTCATGC GACCAACCGA TGTGGGTGAG GAAGTGTACC GGGCCGCCTG CGATATACTC
TCGCGCCTTG ATGATTTGGA CGATTTTCTT GGCGGCATAA AACAAGGGGA GAGCGGTCAT
ATTCGCATCG GACTTGTCAC CACGGCCAAG TATGTGATGC CCCGCATTCT GGGGCCTTTT
TATCGTCGCT TCCCCAAGGT GCAGGTGACG CTGAGTATAG GTAACCGTGC TCATGTGCTG
AATCGCTTTG CCCATCAGGA GGATGACCTC TACCTCTTCA GCCATCCACC CGCAGGGGAA
TCTGTGCTGG CTTCGCGGAT TATCACCAAT CCGCTTAAAT TGATTGCCCC GGCCGATCAC
TGGGCGGTGG GGCAAAAAGG CCTTGGATTT GACGTGCTCA AGGGCGAGCG TTTTATTATG
CGCGAGCCGG GTTCGGCCAC CCGGATGATG TTTGAAAGCT GGCTCAGTGC CCGTGGCATC
GAACTCACTG ACATCATGCA AATCGAGAGT AATGAAGCGA TACGGTTAAG CGTGGCATCC
GGGCTGGGGT TGTCGGTGAT TTCTGCCCAT ACCCTCAGCG AGGGCGATAT GGGGCCTGAA
AAGCCTGCGG TGCTGGACGT GGCGGATTTT CCCCTGCGCA GCAACTGGTA TCTGGTGGCA
CGGCGCGATA AACGGCTCCC CCAGAGCGCA TTGCAGCTTA TTCGTTTTAT GGCAGAGCAT
TTGGGGGACT GTATTGACCC CGGTTATGTG GCCGACAACA TAGAGGCACT CCACCGCGTC
TTCACCCCTT CCCGTTAA
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| Protein sequence | MDNPRLKQLS IRLLQVFITV VRLGNVSAAA RQLHLTQPTV SLQLKKIAEL VGEPLLESRD
GVMRPTDVGE EVYRAACDIL SRLDDLDDFL GGIKQGESGH IRIGLVTTAK YVMPRILGPF
YRRFPKVQVT LSIGNRAHVL NRFAHQEDDL YLFSHPPAGE SVLASRIITN PLKLIAPADH
WAVGQKGLGF DVLKGERFIM REPGSATRMM FESWLSARGI ELTDIMQIES NEAIRLSVAS
GLGLSVISAH TLSEGDMGPE KPAVLDVADF PLRSNWYLVA RRDKRLPQSA LQLIRFMAEH
LGDCIDPGYV ADNIEALHRV FTPSR
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