Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0632 |
Symbol | |
ID | 4602885 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | - |
Start bp | 784754 |
End bp | 785461 |
Gene Length | 708 bp |
Protein Length | 235 aa |
Translation table | 11 |
GC content | 54% |
IMG OID | 639779967 |
Product | response regulator receiver protein |
Protein accession | YP_926510 |
Protein GI | 119773770 |
COG category | [K] Transcription [T] Signal transduction mechanisms |
COG ID | [COG0745] Response regulators consisting of a CheY-like receiver domain and a winged-helix DNA-binding domain |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 12 |
Plasmid unclonability p-value | 0.0950707 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGGGATCTG CTGTAAAACA CAAACTGCTG CTGATTGAAG ACGACTTGCC CCTGGCAGAA CTCATTGTGG ATTTTCTCGA GGCCGAGGAG TTCATTGTTA TCCATGCCGA GTCCATCGAA GACGCCTTTA CCAAAAGCCA GGGCCAGAAC ATAGAATTGG TGCTCTGTGA TGTGATGCTG CCCGGACAGG ACGGCTTCAG CGCCTTTCCG ACCTTGTCCA AAAAGGTTCC TGCACCCATT ATTTTTATGA CGGCACTGGC CGCACCGGAA GATGAAATCT TTGGTCTGGA GCTCGGTGCG GCCGACTATA TCAGCAAGCC CGTGGTGCCC AACCTGCTGC TTGCGCGCAT CCGCGCCCGA CTCAGTCGTC AGCCATCCCC CCAAAGTAAC AGCCAAATTT GGGAGCAGGA TGGCCTCATC CTGCACAAGG CACATCAACA ACTGTGCTTT GCAGATCAGA ATTACCCGCT GACGACCCAG GAAACCGAAC TCTTGTGGGT CTTTGTGCAC CATTTGGAGC AGGTATTAAG CCGCGAATTC CTGTTTGAGC AAATCATAGG TCGCGAGTAC GACGGCCTTG ACCGGGCCAT GGATCTGAAA ATCTCCCGCC TGAGACGTAA GCTGGAAAAC ATCGGTATCC CGGGTCTGGC CATTCGTACC GTGCACGGCC GGGGTTATCT GCTGAGCTTT GCGACTGACG AGATATGA
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Protein sequence | MGSAVKHKLL LIEDDLPLAE LIVDFLEAEE FIVIHAESIE DAFTKSQGQN IELVLCDVML PGQDGFSAFP TLSKKVPAPI IFMTALAAPE DEIFGLELGA ADYISKPVVP NLLLARIRAR LSRQPSPQSN SQIWEQDGLI LHKAHQQLCF ADQNYPLTTQ ETELLWVFVH HLEQVLSREF LFEQIIGREY DGLDRAMDLK ISRLRRKLEN IGIPGLAIRT VHGRGYLLSF ATDEI
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