Gene Sama_0488 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSama_0488 
Symbol 
ID4602743 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameShewanella amazonensis SB2B 
KingdomBacteria 
Replicon accessionNC_008700 
Strand
Start bp598963 
End bp599883 
Gene Length921 bp 
Protein Length306 aa 
Translation table11 
GC content55% 
IMG OID639779824 
Producthypothetical protein 
Protein accessionYP_926368 
Protein GI119773628 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones27 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGAGCTTTA TTGCAAAGAC CTCGACCCTG ATAATGGCAC TGGGTTTGGC TACAGTGCCT 
GTGATTGGCA ATGCCAAAAA CGACAATGCC TTCGACAATG CCAACCCCAA TGCATCCTTC
CTGCGCTGTG GTACCAAGCA GCCCAGCATC CAGGAAGCCG AATTACGTGA AAAACATTTT
CAAACCTTGA AGGCCGCCAA AGGTAAGCCC GGTGGCGGAG GCGGTGGCAG CACCTACCAG
CCTCGCCCCA ATGGCAGTGT AGCGGTTGAC GTATATATGC ACGTAATCAC CGATAACAGT
GGCAACGGTA ACTTGTCTGC AGGTGCAATA GATGCCCAAA TCAACGTGCT GAACGATGCT
TATGCCAATA CGCCCTTTAC CTTTAAAGTG GCAGGTATCA CCCGTACCGC CAACAACAGT
TGGTACACGG CTACCCATGG TTCGACCGCT GAGAAGGAAA TGAAGGCGGC ACTGCGTCAG
GGCGATGCTG CCGATTTGAA CTTCTACACC AATAACATGG GTGGCGGCCT GCTTGGCTGG
GCAACCTTCC CAAGCAGCTA TTCCTCTGAC CCGGTGAATG ATGGTGTGGT AGTGCTTTAC
TCCAGCCTGC CCGGCGGCAG CGCCGCGCCC TATAACGAAG GCGATACAGG CACCCATGAA
GTGGGCCACT GGCTCGGGTT GTATCATACC TTCCAGGGTG GCTGCAGCGG CAATGGTGAC
TATGTGGCCG ACACTCCAGC CGAGCGCAGT CCGGCTTATG GTTGTCCGGT GAACCGCGAT
TCCTGCGCCG GTAACCGTTA TCCTGGCCTC GACCCCATCA CCAACTTCAT GGATTACACC
GATGACTCCT GCATGTATGA GTTTTCGGAA GGTCAGGCCA ATCGCGCTGA TGAGCTGAGC
TTCATCTACC GGAGTCTTTA A
 
Protein sequence
MSFIAKTSTL IMALGLATVP VIGNAKNDNA FDNANPNASF LRCGTKQPSI QEAELREKHF 
QTLKAAKGKP GGGGGGSTYQ PRPNGSVAVD VYMHVITDNS GNGNLSAGAI DAQINVLNDA
YANTPFTFKV AGITRTANNS WYTATHGSTA EKEMKAALRQ GDAADLNFYT NNMGGGLLGW
ATFPSSYSSD PVNDGVVVLY SSLPGGSAAP YNEGDTGTHE VGHWLGLYHT FQGGCSGNGD
YVADTPAERS PAYGCPVNRD SCAGNRYPGL DPITNFMDYT DDSCMYEFSE GQANRADELS
FIYRSL