Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sama_0488 |
Symbol | |
ID | 4602743 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Shewanella amazonensis SB2B |
Kingdom | Bacteria |
Replicon accession | NC_008700 |
Strand | + |
Start bp | 598963 |
End bp | 599883 |
Gene Length | 921 bp |
Protein Length | 306 aa |
Translation table | 11 |
GC content | 55% |
IMG OID | 639779824 |
Product | hypothetical protein |
Protein accession | YP_926368 |
Protein GI | 119773628 |
COG category | |
COG ID | |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | GTGAGCTTTA TTGCAAAGAC CTCGACCCTG ATAATGGCAC TGGGTTTGGC TACAGTGCCT GTGATTGGCA ATGCCAAAAA CGACAATGCC TTCGACAATG CCAACCCCAA TGCATCCTTC CTGCGCTGTG GTACCAAGCA GCCCAGCATC CAGGAAGCCG AATTACGTGA AAAACATTTT CAAACCTTGA AGGCCGCCAA AGGTAAGCCC GGTGGCGGAG GCGGTGGCAG CACCTACCAG CCTCGCCCCA ATGGCAGTGT AGCGGTTGAC GTATATATGC ACGTAATCAC CGATAACAGT GGCAACGGTA ACTTGTCTGC AGGTGCAATA GATGCCCAAA TCAACGTGCT GAACGATGCT TATGCCAATA CGCCCTTTAC CTTTAAAGTG GCAGGTATCA CCCGTACCGC CAACAACAGT TGGTACACGG CTACCCATGG TTCGACCGCT GAGAAGGAAA TGAAGGCGGC ACTGCGTCAG GGCGATGCTG CCGATTTGAA CTTCTACACC AATAACATGG GTGGCGGCCT GCTTGGCTGG GCAACCTTCC CAAGCAGCTA TTCCTCTGAC CCGGTGAATG ATGGTGTGGT AGTGCTTTAC TCCAGCCTGC CCGGCGGCAG CGCCGCGCCC TATAACGAAG GCGATACAGG CACCCATGAA GTGGGCCACT GGCTCGGGTT GTATCATACC TTCCAGGGTG GCTGCAGCGG CAATGGTGAC TATGTGGCCG ACACTCCAGC CGAGCGCAGT CCGGCTTATG GTTGTCCGGT GAACCGCGAT TCCTGCGCCG GTAACCGTTA TCCTGGCCTC GACCCCATCA CCAACTTCAT GGATTACACC GATGACTCCT GCATGTATGA GTTTTCGGAA GGTCAGGCCA ATCGCGCTGA TGAGCTGAGC TTCATCTACC GGAGTCTTTA A
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Protein sequence | MSFIAKTSTL IMALGLATVP VIGNAKNDNA FDNANPNASF LRCGTKQPSI QEAELREKHF QTLKAAKGKP GGGGGGSTYQ PRPNGSVAVD VYMHVITDNS GNGNLSAGAI DAQINVLNDA YANTPFTFKV AGITRTANNS WYTATHGSTA EKEMKAALRQ GDAADLNFYT NNMGGGLLGW ATFPSSYSSD PVNDGVVVLY SSLPGGSAAP YNEGDTGTHE VGHWLGLYHT FQGGCSGNGD YVADTPAERS PAYGCPVNRD SCAGNRYPGL DPITNFMDYT DDSCMYEFSE GQANRADELS FIYRSL
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