| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_3198 |
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| Symbol | |
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| ID | 4074336 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008036 |
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| Strand | + |
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| Start bp | 10057 |
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| End bp | 11700 |
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| Gene Length | 1644 bp |
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| Protein Length | 547 aa |
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| Translation table | 11 |
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| GC content | 59% |
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| IMG OID | 638004399 |
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| Product | nickel-dependent hydrogenase, large subunit |
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| Protein accession | YP_611130 |
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| Protein GI | 98152881 |
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| COG category | [C] Energy production and conversion |
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| COG ID | [COG0374] Ni,Fe-hydrogenase I large subunit |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | n/a |
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| Plasmid unclonability p-value | n/a |
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| Plasmid hitchhiking | n/a |
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| Plasmid clonability | n/a |
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Fosmid Coverage information |
| Num covering fosmid clones | n/a |
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| Fosmid unclonability p-value | n/a |
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| Fosmid Hitchhiker | n/a |
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| Fosmid clonability | n/a |
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Sequence |
| Gene sequence | ATGGCGCGCA GCGAAGCGCG CCGCACACAG AATTTCGGGA GAATTACAAT GGCAGCTACA
CAAACCCTCG ACATCTCGCC CGTTGGCCGG GTGGAGGGCG ACCTTGATGT CCGTGTCGAC
ATCGAGAACG GGATCGTCAC CAATGCATGG ACGCAAGCGG AAATGTTCCG CGGCTTCGAG
GTCATCCTCA AGAACAAGGA TCCACAGGCC GGGCTTGTCG TTACGCCTCG TGCTTGCGGA
ATCTGCGGTG CCTCGCACCT TTCCTGTGCG GCATGGGCGC TTGACACTGC CTGGGGTACG
ACCGTTCCGC GCAACGCCAT TCTCGCCCGC AACCTCGGGC AAATCGTCGA AACCATCCAG
TCGATCCCGC GCCATCATTA TGGCCTGTTC ATGATCGACT ACACCAACCA GAACTATGCG
AAGTCCAAGT TCTACGAAGA AGCGGTGAAG CGCTATGCGC CCTTCACAGG GACCTCCTAT
GAAGCGGGTG TGACCATTTC GGGCCGCCCG GTAGAAATCT ATGCCCTGCT TGGCGGGCAG
TGGCCGCATT CTTCCTTCAT GGTTCCCGGC GGCGTGATGT GCGCCCCGAC TCTGACCGAC
GTGACCCGCG CATGGTCGAT CCTGGAGCAT TTCCGCCGCA ACTGGATCGA ACCGCTGTTC
CTTGGATGCT CGATGGAGCG CTATGAGGAA ATCAGGACTT ATGACGACCT GATGGCGTGG
CTGGACGAAA AGCCCGAGCA TGCCAATTCG GACCTTGGCA TGTTCATCCG CATGTCGCTC
GATATCGGGC TCGACAAATA TGGCAAGGGC CACGGCAAGT TCATCTCCTG GGGCTATCTC
CCCCATGAAG ACCGTTACAA CAATCCGACG ATTGAAGGTC GCAATGGCGC GGTCATCATG
AAGTCGGGCG TGTTCGATGG TGCCAGCGAC ACTTTCAAGC TCATGGATCA GGGCAACACC
CGTGAGGACA TGCAGCATGC CTGGTACGAT GAAGGTGACG GCCTCCATCC GTTCGACCGG
ACAACCAATC CGGTAGCCAA GAACGACATC GACACAGACG GAAAGTACAG CTGGTCAACC
GCTGTCCGCC ACAGCGACAA CGGACGTCTT GAAGCAGGGC CGCTGGCTCG CCAGCTGATA
GCAGGTGGCG ATCACGGCGA GAGTTGGCAG CACAGTGATG GCCTGGTGCT CGACATGTAT
CGCAAGCTGG GCGGCGCTTC GATCTACCTG CGTCACTTCG CCCGTCTGCA CGAACTGTGC
AAACTCTATC GGGAATCCGA GCGAATTCTG CGCGAGTTCC GCCTCAATGA CGAGTGGTAC
ATCAAGCCGA CCGAGCGCGA TGGCCAGGGA TGGGGCGCGA CCGAGGCTGC GCGCGGTGCC
TTGTGCCACT GGATCGACGT GCGCGATGGC AAAATCCACA ACTACCAGAT CATTGCTCCG
ACCACCTGGA ACGTTGGTCC GCGGGCGAGC AATGGCGAGT TGGGGCCGAT CGAGGAGGCA
CTCATCGGCA CCCCGATTGC AAATACTTCC GATCCGGTTG AAGTCGGGCA TGTTTGCCGT
TCCTACGACA GCTGCCTGGT TTGCACGGTC CACGCACACG ATGCGAAAAC GGGCGAGGAA
CTGGCCCGCT TCCGCACAGC TTGA
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| Protein sequence | MARSEARRTQ NFGRITMAAT QTLDISPVGR VEGDLDVRVD IENGIVTNAW TQAEMFRGFE
VILKNKDPQA GLVVTPRACG ICGASHLSCA AWALDTAWGT TVPRNAILAR NLGQIVETIQ
SIPRHHYGLF MIDYTNQNYA KSKFYEEAVK RYAPFTGTSY EAGVTISGRP VEIYALLGGQ
WPHSSFMVPG GVMCAPTLTD VTRAWSILEH FRRNWIEPLF LGCSMERYEE IRTYDDLMAW
LDEKPEHANS DLGMFIRMSL DIGLDKYGKG HGKFISWGYL PHEDRYNNPT IEGRNGAVIM
KSGVFDGASD TFKLMDQGNT REDMQHAWYD EGDGLHPFDR TTNPVAKNDI DTDGKYSWST
AVRHSDNGRL EAGPLARQLI AGGDHGESWQ HSDGLVLDMY RKLGGASIYL RHFARLHELC
KLYRESERIL REFRLNDEWY IKPTERDGQG WGATEAARGA LCHWIDVRDG KIHNYQIIAP
TTWNVGPRAS NGELGPIEEA LIGTPIANTS DPVEVGHVCR SYDSCLVCTV HAHDAKTGEE
LARFRTA
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