Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_3045 |
Symbol | |
ID | 4083053 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 3195281 |
End bp | 3196588 |
Gene Length | 1308 bp |
Protein Length | 435 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638011431 |
Product | major facilitator transporter |
Protein accession | YP_618082 |
Protein GI | 103488521 |
COG category | [G] Carbohydrate transport and metabolism |
COG ID | [COG2271] Sugar phosphate permease |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 24 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 8 |
Fosmid unclonability p-value | 0.116198 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGCACAGG CAATCGCAGA CAGGGGTGCG GCGGTGCCGG TGCCCCGTTC GGGCCGCTAC CGCTGGCTGA TCGTCGCGGT GCTCTTCGCC GCGACCACCG TCAACTATAT CGACCGCACC ATGCTCGGCC TGCTCGCGCC GACGCTTGGG CAGGAGCTGG GGTGGAGCGA GAATGACTAT GGCAACATCG TCACCGCATT CCAGGCGGCC TATGCACTCG GCTTTCTGTT CATGGGCTGG CTGATCGACC GCTTCGGACC CAAGATCGGC TATGCGATCG CGATCGGCAT CTGGACGGTC GGCCATGTCG CGCACGGCTT TGCGTCGTCG GTCGTCTCCT TCATGCTTGC GCGCGTCATA CTGGGCGTCG GCGAAGCGGG GCATTTTCCC TCGGTCGTCC GCGCGTCGAG CGAATGGTTC CCGCAAAAGG AACGCTCCTA TGCGATCGGC TGGGTCAATA GCGCGACGAC GATCGGCGTC ATCCTGACCG CGCCGACCGT CGCGCTCTTC ATGCGCGTGC TCGGCTTCGA TTGGCGTGAA ACCTTCATCT ATACCGGCAT TTTCGGCGTC GTCCTGCTGC TGCTCTGGCT CTGGCTCTAC AGCAACCCGC GCGAAAGCGG GAAGGTCAGC GAGGCCGAAC TGGCGTGGAT CGAGCATGAC CCGCCCGAAC AGGTCGAACG CATCGGCTGG AGCCGGATCG TCACCAAGCG CGAAGCCTGG GCCTTTGCGA TGGCCAAGTT TCTGACCGAC CCGGTGTGGT TCCTGATGCT CTTCTGGCTG CCCAAATATT TCAGCTCGAC TTATGATGTG GACCTCAAGA TCGTGCTGCT GCCGATGATC ATCATGTATC TGCTCTCCGA TGTCGGCAGC ATCCTCGGCG GCTGGGTGTC GTCGAAGCTG ATCCAGACCG GCCACAGCGT CAATTTTGCG CGCAAGGTGA CGATGATCGG CGCGGGCCTT TGCGTATTGC CGCTCTTGTT CGTGACGGGG CTCGAAAATA TGTGGCTCGC GGTCGTGCTG ATCGGCATCG CGCTCGCGGG GCATCAGGCC TTTTCCTCGA CGATCCTGTC GATCCCGCCC GACATGTTTC CGAAACGCGC GGTCGGATCG GTAATCGGGC TCGGCGGTTT CATGGGCGGC GTCGGCGGCA TGATCATGGC GAAGTCGACG GGGCTTGTGC TCGATGCGAC GGGGGGCAAT TACACCCTCA TCTTCGCCGC CTGCACCACC GTCTATTTCC TCGCGGTGCT CGCGGTGCAT ATCCTCAGCC CGCGCCTCGC GCCGGTCAGC GTCGAAGGCG CGAAATAG
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Protein sequence | MAQAIADRGA AVPVPRSGRY RWLIVAVLFA ATTVNYIDRT MLGLLAPTLG QELGWSENDY GNIVTAFQAA YALGFLFMGW LIDRFGPKIG YAIAIGIWTV GHVAHGFASS VVSFMLARVI LGVGEAGHFP SVVRASSEWF PQKERSYAIG WVNSATTIGV ILTAPTVALF MRVLGFDWRE TFIYTGIFGV VLLLLWLWLY SNPRESGKVS EAELAWIEHD PPEQVERIGW SRIVTKREAW AFAMAKFLTD PVWFLMLFWL PKYFSSTYDV DLKIVLLPMI IMYLLSDVGS ILGGWVSSKL IQTGHSVNFA RKVTMIGAGL CVLPLLFVTG LENMWLAVVL IGIALAGHQA FSSTILSIPP DMFPKRAVGS VIGLGGFMGG VGGMIMAKST GLVLDATGGN YTLIFAACTT VYFLAVLAVH ILSPRLAPVS VEGAK
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