Gene Sala_3036 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_3036 
Symbol 
ID4083044 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp3182873 
End bp3183901 
Gene Length1029 bp 
Protein Length342 aa 
Translation table11 
GC content69% 
IMG OID638011422 
ProductPfkB 
Protein accessionYP_618073 
Protein GI103488512 
COG category[G] Carbohydrate transport and metabolism 
COG ID[COG0524] Sugar kinases, ribokinase family 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones22 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.835222 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGGGGAAGG ATGAGATTTT GAACGGCCGC CTTGTCTTTT TCGGCGAACT GCTGATCCGC 
CTCAATGCGC CGGGCAACGA GCTGCTGATG CAGTCGCCGT CGCTGGCGCT CCATGTCGGC
GGCGCGGAAG CCAATGTCGC GATCGGGCTC GCCCATCTCG GCCATGCCTG CGCGATGGTA
TCGCGCGTTC CGGACAATGC GCTGGGTCGC GGCGCAGTGG CGGCGGTGCG CGGCGCGGGC
GTCGACTGCA CCGCCGTCAC GACCGCGCCG GGCCGCATGG GGCTCTATTT CCTCAGCGTC
GGGGCGGGGC TGCGCTCATC CGAAATCGTC TATGACCGCG CGGGATCGAG CTTTGCGGCG
AGCGGCGCGG GCGATTATGA CTGGGACGCG CTGCTGGACG GTGCGGCGCT GCTCCACCTG
TCGGGCATCA CCCCTGCTTT GGGCCCGCGC TCGGCCGATG CCGCGCTGGC GGCGGCGCGC
GCGGCGAAGC GGCTCGGCGT GCCGGTCAGC TTCGACGGCA ATTACCGCGC GATGCTGTGG
GAAGCATGGG ACAGCGATCC GCGCGCGGTC CTGTCCGAGC TGATCGGCAG CGCCGATATC
TTGTACGGCA ACCACCGCGA CCTGTCGCTG GTGCTGGGGC AGGTGTTTAG CGGCGAGGGC
GAGGACCGGC GGCGCGAGGC GGCTGAAGCG GGCTTTGCAG CCTTTCCTGA CCTCAAACTC
ATCGCTTCGA CCGCGCGCCA TACCGTCAGC GCCGATCATC ACCGCATCGC GGCGCGCGTC
GATCTTTGCG GCAGTTGCCA TCAGACCGAC GAGATCAACG TCACCGGCAT CGTCGACCGT
ATCGGGGCGG GCGACGCCTT TGCCGCGGGG GTGCTCCATT CGTATCTGAG TGGGGGCACC
GCCGAAGCCA TGGCGATGAG CGGCCTCGCG CTCACCTGCC TCAAACACTC GCTCCCCGGC
GACGCGAGCC GATTCGGCCA GCGCGACATC GACGCTTTCC ACGGCGGCGG GCTCGATGTC
CGGCGCTGA
 
Protein sequence
MGKDEILNGR LVFFGELLIR LNAPGNELLM QSPSLALHVG GAEANVAIGL AHLGHACAMV 
SRVPDNALGR GAVAAVRGAG VDCTAVTTAP GRMGLYFLSV GAGLRSSEIV YDRAGSSFAA
SGAGDYDWDA LLDGAALLHL SGITPALGPR SADAALAAAR AAKRLGVPVS FDGNYRAMLW
EAWDSDPRAV LSELIGSADI LYGNHRDLSL VLGQVFSGEG EDRRREAAEA GFAAFPDLKL
IASTARHTVS ADHHRIAARV DLCGSCHQTD EINVTGIVDR IGAGDAFAAG VLHSYLSGGT
AEAMAMSGLA LTCLKHSLPG DASRFGQRDI DAFHGGGLDV RR