| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_3015 |
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| Symbol | |
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| ID | 4082847 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 3157626 |
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| End bp | 3159353 |
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| Gene Length | 1728 bp |
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| Protein Length | 575 aa |
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| Translation table | 11 |
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| GC content | 68% |
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| IMG OID | 638011402 |
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| Product | membrane-flanked domain-containing protein |
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| Protein accession | YP_618053 |
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| Protein GI | 103488492 |
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| COG category | [S] Function unknown |
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| COG ID | [COG3428] Predicted membrane protein |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.146242 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGGCTGTTT CGCACCGACA CGATCGTCCC CTTCGTGCGC GTCCAGCATA TCGACGTCGG
GCAGGGGCCG ATCGAACGCT GGTTCGGCCT GTCGCACCTG ATCGTCCACA CGTCGGGCAC
GCACAACAGC ACGGTCACGC TGCCCGGCCT GCCAGCCGAT TTGGCCGCCG CGATGCGCGA
GACGATCCGC CGCCATATCC AGACCGATTT TGCATGACCG AGGCCGCGAC CGCGTTTCCC
CGAACCCGCG AAGCGACGGA GTGGCAGCGA CTGCATCCCG CGACGCTCGC GCTCGCCATC
GCCGGGCTGG GTCCCAAATC GCTCAACCTG CTGCCCGCGG TCGCGGCGCT GGGCTTTACC
GGCAACTGGC GGTGGATCGT CCCCGCGGTT CTGGCCTTCC TGCTCATTTC GCTCACCGCC
GCCTGGTTCC AGTGGCTGCG CTTCCGGTTC CTTGTCGGCG ACGACGAGGT GCTGATCGAA
AGCGGCGTCT TCGCGCGCCA GCACCGGACC ATCCCCTTCG ACCGCATCCA GGACGTCAGC
ATCGAACAGG GCCTCGTCGC GCGCGCGCTC GGCATCGCCA AGGTCGGATT TGAAACGGGG
GCGGGCGGTC AGGAGAATGA CGCCCATCTC GATTCGATCG GGCTGGACGC GGCGCAGGCG
CTGCGCGCGA CGATCCGCGC GCACCGCAGC GGCACGGTCG CGGCGGCCAC CGATGCTGCA
CTGGAAAGCG CGGTCGCCGA CGAGGATCGG CTGCTCTTCA CGATGGGGCC GTGGCGGCTG
CTGATCGCCG GACTGTTCAA TTTCTCGCTC GCCGCGCTCG CCGTTGTCGG CGCCGCGATG
CAGTTTTTCG ACGGGCTGCT GCCTTTCGAT TTCAACATCT TCAACCCGAT GGACTGGATC
GAACTTGCCG AGGATTACGG GCTCGACCAA TGGCTGCTCG CGCATCGCTG GGTCGCGGGG
ATCGGCGCGG CGGCGTCGTT GCTCCTCATC GGCTTTGCAA GCGGCATCGC GACGATGATG
TTCGCCAACT GGAACTTCCG CCTGACGCGC GAGCCGCGTA CGCTGCGCCG CACGCGGGGT
TTGACGACGC GCACCGATGT CGCGCTGCCC ATCCGGCGCG TGCAGGCGGC GATCCTGATC
ACCGGCTGGT TTCGTCGCCG GTTCGGCTGG CACGAACTGA GGCTCCAGAG CCTCGCGAGC
GATGGCGAGA AGGAGCGCGA CCATCAGATC GTCCCCTTTG GTCGCTTCGC CGAAATCGAC
CCGATCCTCG CCGAAGTCGG CATCGCACGG CCCGACGAGG CCGCCGGCTG GCACCAGAGC
CACGGTGTCG TCGCGCTCGG CGGGCTCATC GGCGCGCTGT TCGCTGCAAT CGGCGGACTG
GTCGCGACCG CGCTCGGCCA GCCGCTCGGC GCGCTGGGGA TCGTCGCGGG CGCGCTGATC
GCCGCTGCGT CGCTCTTTGG CGCGCGCTTC CATCGCTGGG CCGATCTTGG CGATCAACTC
GCCATCCGTC GCGGCTGGTG GAAGCCGCGC ACGACGCTGC TCCCGCACGC CTCGGTGCAA
AGCATCGACC TCAAGACCGA TTTCATTCAG CGCCCGCTCG GCCTTGCGAC GCTGGTGTTC
GGCGTGCCGG GGGGCAGCGC GCTCGCGGCG CACGAGATTC CGGCGATCCC GGTGATGACA
GCGCGCAAGC TGCGCGCGCG GATCCTTGCC GCACGGAGTC GGCGATGA
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| Protein sequence | MAVSHRHDRP LRARPAYRRR AGADRTLVRP VAPDRPHVGH AQQHGHAARP ASRFGRRDAR
DDPPPYPDRF CMTEAATAFP RTREATEWQR LHPATLALAI AGLGPKSLNL LPAVAALGFT
GNWRWIVPAV LAFLLISLTA AWFQWLRFRF LVGDDEVLIE SGVFARQHRT IPFDRIQDVS
IEQGLVARAL GIAKVGFETG AGGQENDAHL DSIGLDAAQA LRATIRAHRS GTVAAATDAA
LESAVADEDR LLFTMGPWRL LIAGLFNFSL AALAVVGAAM QFFDGLLPFD FNIFNPMDWI
ELAEDYGLDQ WLLAHRWVAG IGAAASLLLI GFASGIATMM FANWNFRLTR EPRTLRRTRG
LTTRTDVALP IRRVQAAILI TGWFRRRFGW HELRLQSLAS DGEKERDHQI VPFGRFAEID
PILAEVGIAR PDEAAGWHQS HGVVALGGLI GALFAAIGGL VATALGQPLG ALGIVAGALI
AAASLFGARF HRWADLGDQL AIRRGWWKPR TTLLPHASVQ SIDLKTDFIQ RPLGLATLVF
GVPGGSALAA HEIPAIPVMT ARKLRARILA ARSRR
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