| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_3014 |
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| Symbol | |
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| ID | 4082846 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 3155863 |
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| End bp | 3157629 |
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| Gene Length | 1767 bp |
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| Protein Length | 588 aa |
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| Translation table | 11 |
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| GC content | 72% |
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| IMG OID | 638011401 |
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| Product | single-stranded-DNA-specific exonuclease RecJ |
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| Protein accession | YP_618052 |
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| Protein GI | 103488491 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0608] Single-stranded DNA-specific exonuclease |
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| TIGRFAM ID | [TIGR00644] single-stranded-DNA-specific exonuclease RecJ |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.858016 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGCGAGG CGGCACTGGG AATCACCTGC TCGATCGCGG GCCAGTCGTG GCGCTGGCGG
CGTGCGAGCG CCGACATGGC GGCGGAAAAT CTCGCGCCCG ACGACCTTGT CACGCAATTG
CTGCTCGCGC GCGGGGTGGC GCGCGACGAT CTCGATCGCC AGCGCACCCC GACCCTGCGC
GGCTTCATGC CCGACCCGTC GCTGTTCCGC GACATGGATG CCGCCGCGGC GCGGCTCGCC
GATGCCGTCG AACGCCGGGA GGCGGTGACG ATCTTCGGCG ATTATGACGT CGACGGGGCG
ACATCGGCCG CGCTGCTCGT CCGCCTGCTG CGGGCGCTCG GCACAACTGT CGGCGCCTAT
ATCCCCGACC GTCTGATGGA AGGCTATGGC CCGTCGGGCG CCGCGCTGGT GAAGATCGGC
GAGGCGGGGT CGAAACTTAT CGTCACCGTC GATTGCGGCG CACAGGCGTT CGAGGCGATC
GCCGAAGCCA ATGCCGCCGG CGTCGAGGTG ATCGTCGTCG ACCATCACCA ATGCGCGACC
AGCCTGCCCG CCGCGCTTGC GCTGGTGAAC CCCAACCGGC TCGACGAGTC GCCCGACGCA
GCGGTCCACG GCAATCTCGC CGCGGTCGGC GTCGCCTTCC TGCTCGGCGC GGCGCTGCTT
CGCACATTGC GCGCGCGCGG CTTTTTTGCG GGCCGCGAGG AACCCGCGCT GATCGAGCTT
CTGGACCTTG TCGCACTCGG CACCGTCGCC GACGTCGCGC GGCTCACCGG CTTCAATCGC
GCGCTGGTGA CGCAGGGGCT GAAAGTGATG GCGCGGCGCG GCAATATCGG CCTCGCCGCG
CTGATGGACG CGGCGCGGCT GACCAGGCCG CCGGGCGCAA GCGACATGGG CTTCGCGCTC
GGTCCGCGCA TCAACGCGGG CGGGCGCGTC GGCAAGTCGG ACCTCGGCGT GCGCCTGCTC
ACGACCGACG ATCCGCAGGA AGCCGCCGAT ATCGCGCAGC AACTGTGCCG CCTCAACGAG
GAGCGCCGCA CGATCGAGGC GGCGGTGCTC GACGAGGCGC TGGCGGCGAG CGCCGCGTGC
GGCAACGCGC CCGTCGCGAT TGTCGCCGGC GAAGGCTGGC ACCCCGGCGT GATCGGCATC
GTCGCCGGGC GGCTCAAGGA ACGGTTGCAC CGCCCCGCGA TCGTGATCGC GGTGGACGCG
GACGGTATCG GCAAGGGATC GGGGCGCTCG ATTTCGGGCG TCGACCTGGG CGCAGCCATT
CTCGCCGCCA AGGAAACGGG CTTGCTCGTC GCCGGCGGCG GCCATGCGAT GGCGGCGGGA
CTCACGGTGG CCGCCGACCG GGTCGATGCG CTTGGCGCCT TTTTGAGCGA CCGCCTCGCC
GCCGATGTCG AGCGCGCGAG CGGCGAGCGT GCGCTGCTGA TCGACGCCGT GCTCGCGCCG
CGCGGGATCT CGCCGCTCTG GTGCGACGCG ATCGAAAGCG CTGGCCCCTA TGGCGCCGGT
TGGCCCGCGC CGCGCGTCGC GACGGGGCCG GTGCGAATCG TCGAATCGGG GATCGTCGGC
ACCGATCATG TCCGCCTGAT CGTCGCGGGC GACGATGGCG CGCGGTTCAA GGCGGTCGCC
TTTCGCAGCG CCGAAACGGT GCTGGGCCAG ACCCTGCTCG GCGCGCGGGG ACGCAAGCTG
TGGCTCGCGG GCCGGGCAAA ACGCGACGAC TGGGGCAGCC GCCCCGCCGC CGAGCTGCAC
CTCGAGGATG CTGCCTGGGC CGACTGA
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| Protein sequence | MSEAALGITC SIAGQSWRWR RASADMAAEN LAPDDLVTQL LLARGVARDD LDRQRTPTLR
GFMPDPSLFR DMDAAAARLA DAVERREAVT IFGDYDVDGA TSAALLVRLL RALGTTVGAY
IPDRLMEGYG PSGAALVKIG EAGSKLIVTV DCGAQAFEAI AEANAAGVEV IVVDHHQCAT
SLPAALALVN PNRLDESPDA AVHGNLAAVG VAFLLGAALL RTLRARGFFA GREEPALIEL
LDLVALGTVA DVARLTGFNR ALVTQGLKVM ARRGNIGLAA LMDAARLTRP PGASDMGFAL
GPRINAGGRV GKSDLGVRLL TTDDPQEAAD IAQQLCRLNE ERRTIEAAVL DEALAASAAC
GNAPVAIVAG EGWHPGVIGI VAGRLKERLH RPAIVIAVDA DGIGKGSGRS ISGVDLGAAI
LAAKETGLLV AGGGHAMAAG LTVAADRVDA LGAFLSDRLA ADVERASGER ALLIDAVLAP
RGISPLWCDA IESAGPYGAG WPAPRVATGP VRIVESGIVG TDHVRLIVAG DDGARFKAVA
FRSAETVLGQ TLLGARGRKL WLAGRAKRDD WGSRPAAELH LEDAAWAD
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