| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2827 |
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| Symbol | |
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| ID | 4080408 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2983598 |
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| End bp | 2984311 |
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| Gene Length | 714 bp |
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| Protein Length | 237 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638011211 |
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| Product | pyrimidine 5-nucleotidase |
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| Protein accession | YP_617865 |
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| Protein GI | 103488304 |
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| COG category | [R] General function prediction only |
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| COG ID | [COG1011] Predicted hydrolase (HAD superfamily) |
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| TIGRFAM ID | [TIGR01509] haloacid dehalogenase superfamily, subfamily IA, variant 3 with third motif having DD or ED
[TIGR01993] pyrimidine 5'-nucleotidase |
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Plasmid Coverage information |
| Num covering plasmid clones | 16 |
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| Plasmid unclonability p-value | 0.112564 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 6 |
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| Fosmid unclonability p-value | 0.0242793 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGCCCCTCC TCCTTCCACC CCCTATGCGC CGCCCCATGC CGCCGCCGCT CGACCCTATC
GACAGCTGGA TCTTCGATCT CGACAACACG CTCTATCCGC CTTCGGCAAA GCTGTTCGAC
CTGATCGACG AACGCATGGG CGCGTTCATC ATGCGGTTGC TGGGTGTCGA CGCGATCGAG
GCGCGGCGTG TGCAGAAGCG ATATTTCCAC GACCATGGCA CGACGATGGC GGGGCTGATG
CGCCATCACG GCGTCGATCC CGAAGAGTTT CTGCGCGACG TCCACGCGAT CGACCTCGAC
CGGCTGACCC CCGACCCGCG GCTGCGCGCC GGGCTCGAAC GGCTGCCGGG ACGCAGGCTG
GTCTTCACCA ACGCCGACGC CGATTATGCG GCGCGCGTGC TCGAAGCGCG CGGGATCGCC
GACCTGTTCG ACGGCATCTG CGACATTCGC ATCACCCGCT ACACGCCCAA GCCGGAGGCA
ACCGCCTATG ATGTGATGGT CGCGCACCTC GGCGTCGATC CGGTGCGGAG CCTGTTCGTC
GAGGATATGG CGCGCAACCT GACGCCTGCA AAAGCGCTCG GCATGACGAC CGTGTGGCTG
GACAATGGCA GCGAAAGCGG CCATCGGGAC CACCTGCCCG ACCATGTCGA TTTCCACGCG
ACCGACATTG CCGACTGGCT CGACAACCTG CCTTCACCAT GGGGAATCGC ATGA
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| Protein sequence | MPLLLPPPMR RPMPPPLDPI DSWIFDLDNT LYPPSAKLFD LIDERMGAFI MRLLGVDAIE
ARRVQKRYFH DHGTTMAGLM RHHGVDPEEF LRDVHAIDLD RLTPDPRLRA GLERLPGRRL
VFTNADADYA ARVLEARGIA DLFDGICDIR ITRYTPKPEA TAYDVMVAHL GVDPVRSLFV
EDMARNLTPA KALGMTTVWL DNGSESGHRD HLPDHVDFHA TDIADWLDNL PSPWGIA
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