| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2726 |
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| Symbol | |
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| ID | 4082465 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 2872140 |
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| End bp | 2872631 |
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| Gene Length | 492 bp |
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| Protein Length | 163 aa |
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| Translation table | 11 |
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| GC content | 66% |
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| IMG OID | 638011109 |
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| Product | 16S rRNA processing protein RimM |
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| Protein accession | YP_617764 |
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| Protein GI | 103488203 |
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| COG category | [J] Translation, ribosomal structure and biogenesis |
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| COG ID | [COG0806] RimM protein, required for 16S rRNA processing |
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| TIGRFAM ID | [TIGR02273] 16S rRNA processing protein RimM |
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Plasmid Coverage information |
| Num covering plasmid clones | 30 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | GTGACCGCCG ACCGTCCCGT CACCCTCGCC GCCATTGCGG GCGCGCACGG GGTGCGGGGC
GAGGTGCGGC TCAAATTGTT CGGCGAAGGC GCGGAGACTC TCCGCGCCTT TTCCGTTTTT
GACGCGGGCG ATCGCAAGCT GACCCTGAAA TCGGTACGCC CGGCCAATCA GGGCGCGGTC
GCCGCGTTTG TGGAAATTGC CGACCGCAGC GCGGCCGAAG CGCTCCGCGG CACATTGCTC
ACCGTCCCGC GCTCGGCGCT TCCGCCACTG GGGCCAGGCG AATATTATCA CCACGACCTG
ATCGGCCTGC CCTGCGTTTC GACCGAGGGC GCTCCGGTGG GCCATGTCGC CGCGGTCGAC
AATTTCGGTG CGGGCGACAT CCTTGAAATC GAAAAGCCGG ACGGCAAGCG ATTCATGGTG
CCGATGACGG TCACGGCGGT GCCGACATGG GACGCCGAAA CGGTGACCGT GAACGCGGCA
TTCATCGAAT AG
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| Protein sequence | MTADRPVTLA AIAGAHGVRG EVRLKLFGEG AETLRAFSVF DAGDRKLTLK SVRPANQGAV
AAFVEIADRS AAEALRGTLL TVPRSALPPL GPGEYYHHDL IGLPCVSTEG APVGHVAAVD
NFGAGDILEI EKPDGKRFMV PMTVTAVPTW DAETVTVNAA FIE
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