Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2575 |
Symbol | |
ID | 4081608 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 2715028 |
End bp | 2715654 |
Gene Length | 627 bp |
Protein Length | 208 aa |
Translation table | 11 |
GC content | 60% |
IMG OID | 638010952 |
Product | cation efflux protein |
Protein accession | YP_617614 |
Protein GI | 103488053 |
COG category | [P] Inorganic ion transport and metabolism |
COG ID | [COG1230] Co/Zn/Cd efflux system component |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 13 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGGCGAGC TGGACGTTGA TCCTAGCGCC GCCGACAAGC GGCGGACGTT GTGGATCGTT CTTTGGCTGA ACGTAGCAAT TGCCGCGGGC TTCTTCGCCA CTGGCTATGT GGCGGACTCC AATGCACTGT TCGCCAACGG AGTAGACAAC TCCTCGGACG CAATCGTTTA TGCACTGAGC CTGCTCGCGT TCACCCGCTC GCGCCAGTGG AAGCGCGGCG CTGCGCGCTT TTCGGGAGTC GCGCTTCTGA TCTTCGCAGG CGGGGTGATT GTCGATGCTG TCCGCCGGTT CCTCCAAGGC TCCGAGCCTG GTGGTATCAC GATGATGGGG ATGGCCGCCA TCGCCGGCGG AGTGAACCTT CTCTCACTCC ATCTGCTCAG CAGGCTTAAG GACAAGGATG TGAACCTGCG TGCAGCAACG ACCTTCAGCT TCAACGATTT CGTGTCCAAC GGTGGAGTTC TCCTCGCGGG AATCGTTGTG ATGCTCACCG GCACGAACTG GCCGGACCTT ATCGTCGGCG TCGCGGTTGC CGGCATCGCC CTCTATGGAG GCATCGAAAT TCTGCGCGAC GCGCATATGG ACGTCCATGA CGAGGAAGGG ACGGTGCATG GTAGTAAGCA GGCTTGA
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Protein sequence | MGELDVDPSA ADKRRTLWIV LWLNVAIAAG FFATGYVADS NALFANGVDN SSDAIVYALS LLAFTRSRQW KRGAARFSGV ALLIFAGGVI VDAVRRFLQG SEPGGITMMG MAAIAGGVNL LSLHLLSRLK DKDVNLRAAT TFSFNDFVSN GGVLLAGIVV MLTGTNWPDL IVGVAVAGIA LYGGIEILRD AHMDVHDEEG TVHGSKQA
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