Gene Sala_2562 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2562 
Symbol 
ID4081595 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2702209 
End bp2702616 
Gene Length408 bp 
Protein Length135 aa 
Translation table11 
GC content62% 
IMG OID638010939 
ProductMerR family transcriptional regulator 
Protein accessionYP_617601 
Protein GI103488040 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones36 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones13 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
GTGATCGGAG AGACGATCGC AATTGGCGAG CTGTCGCGCC AGACTGGCTG CAACATCGAG 
ACGATTCGCT ATTATGAGCG GATCGGCCTT ACGCCAAGGG CGAGCCGGCG GGGTCGCTAT
CGCAGCTATG ATACGGCCGA TATCAGGCGG CTGCGGTTCA TCCGCCGTGC GCGCGAGCTC
GGCTTTACGC TCGAAGAGAT CAGCGCACTT ATCGGGATTG CCGCTGCAGG CGAGGTATCA
TGCGCGAATG CGCGCGGTAT CGCTGCCGCG CATCTCGCAA GCGTGCGCGC ACGGCTCCTC
GATCTGCGGC GGATGGAAGA GGTTCTTCAT GGAGTCGTGC GAGCGTGTGA TGCGGGCGAG
CATGCTGGAT GCCCCTTGAT CGAGACGCTT TCTGCGGACG CTGGTTGA
 
Protein sequence
MIGETIAIGE LSRQTGCNIE TIRYYERIGL TPRASRRGRY RSYDTADIRR LRFIRRAREL 
GFTLEEISAL IGIAAAGEVS CANARGIAAA HLASVRARLL DLRRMEEVLH GVVRACDAGE
HAGCPLIETL SADAG