Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2472 |
Symbol | |
ID | 4081310 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 2611327 |
End bp | 2612226 |
Gene Length | 900 bp |
Protein Length | 299 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638010850 |
Product | phosphoribosylpyrophosphate synthetase |
Protein accession | YP_617512 |
Protein GI | 103487951 |
COG category | [E] Amino acid transport and metabolism [F] Nucleotide transport and metabolism |
COG ID | [COG0462] Phosphoribosylpyrophosphate synthetase |
TIGRFAM ID | [TIGR01251] ribose-phosphate pyrophosphokinase |
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Plasmid Coverage information |
Num covering plasmid clones | 27 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 11 |
Fosmid unclonability p-value | 0.477285 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCCCGC CGATGTTCCT GCCGCTGCCC GGTAACGGCA AGTTCGCGGT TGGACTCGCG GGCCTGCTCG GGGGCGAGGT CGGACGGATC GAAACCCGCA GATTTCCGGA CGGTGAGACC TATCTGCGGC TCCTTTCCGA GGTTGCCGGC CGCGACATCG TGCTCGTCTG CACGCTGGAT CGCCCCGATA CCAAGCTGGT TTCGCTTCTT ATCGCAGCCG ACGCGGCCCG CGAGCTCGGC GCCTTCAGCG TAGGGCTCGT AGCCCCATAT CTTGCCTATA TGCGCCAGGA CCGGCGCTTT CAGAATGGCG AGGCAATCAG CTCGCGCAGT TTCGCGCGCC GCATTTCGGG CGCCGTCGAC TGGCTGGTCA CGGCGGATCC CCATCTTCAT CGATATGCCT CGCTCGGCGA CATCTATGAT ATTCGGGCCG AGGCCGTGCA TGCCGCAGCG CCGATTTCCG ACTGGATCAG AACCCATGTC GAGCGGCCGC TCATCATCGG TCCCGACAGC GAAAGCGAAC AATGGGCGAG CGCGATCGCA CGCCGCGCCG GTGCCCCTCA CGCCGTTTGC AGCAAGCTGA GATTGGGCGA TCGCGACGTC AGGATCGCGC TACCCGATCT CTCGGCGCAT ACAGGGCGCA CCCCGGTTCT GGTCGACGAT ATCGCGTCAT CGGCCCGCAC GCTGATCGAA GCGGCGCGGG GAATAGGAGA GGCTGGTTTT CCGCCGCCCG AATGCGTCAT CGTGCATCCG TTATTCGCTC GCGGCGCCTT CGCGGCACTG TCCGCCGAGG CGGGGCGTAT CGTCAGTACC GATGCTGTCG CTCATTCCAG CAACGCCATC AGCCTGCAGC CGGTCGTCGC GGAAGGCGTG CAGCGCCTCC TCGCTAAACC CGATCGATAA
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Protein sequence | MTPPMFLPLP GNGKFAVGLA GLLGGEVGRI ETRRFPDGET YLRLLSEVAG RDIVLVCTLD RPDTKLVSLL IAADAARELG AFSVGLVAPY LAYMRQDRRF QNGEAISSRS FARRISGAVD WLVTADPHLH RYASLGDIYD IRAEAVHAAA PISDWIRTHV ERPLIIGPDS ESEQWASAIA RRAGAPHAVC SKLRLGDRDV RIALPDLSAH TGRTPVLVDD IASSARTLIE AARGIGEAGF PPPECVIVHP LFARGAFAAL SAEAGRIVST DAVAHSSNAI SLQPVVAEGV QRLLAKPDR
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