Gene Sala_2470 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2470 
Symbol 
ID4081308 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2610216 
End bp2610632 
Gene Length417 bp 
Protein Length138 aa 
Translation table11 
GC content62% 
IMG OID638010848 
ProductMerR family transcriptional regulator 
Protein accessionYP_617510 
Protein GI103487949 
COG category[K] Transcription 
COG ID[COG0789] Predicted transcriptional regulators 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones26 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGGGAAGCT ACAAGATCGG AAAGCTCGCC GAAGCCGCGG GCGTGGGGCG CGATACGATA 
CGCTATTATG AGCGGACGGG CTTGCTACCG GCCCCGGGCC GTACCGCGGC CGGCTATCGC
CTTTACAGCG ACGGGGACCT TGAGCGGCTC AACTTCATTC GCGCGTCGCA GGAACTCGGA
TTCACGCTCG AACAGGCGCG CCAGCTTCTC ACCCTCAAGG CATCGGATAC CGCCACCGCG
GCGGCCGTGC TTGCGATCAC GCTCGACAAG GTTCGGGAGG CCGAAACGCG GGTCAGGAAG
CTGACTGAGA TTCGGGATGT GCTGCAGGAC CTCGCCGACA ATTGCCCGCG AGAGGCGCCG
GTCTCCGACT GCAACATAAT CGCATTCTTG GCGGAAAAAC GAAGACCAAA AAAATAG
 
Protein sequence
MGSYKIGKLA EAAGVGRDTI RYYERTGLLP APGRTAAGYR LYSDGDLERL NFIRASQELG 
FTLEQARQLL TLKASDTATA AAVLAITLDK VREAETRVRK LTEIRDVLQD LADNCPREAP
VSDCNIIAFL AEKRRPKK