| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_2460 |
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| Symbol | |
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| ID | 4081337 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | + |
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| Start bp | 2602385 |
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| End bp | 2603017 |
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| Gene Length | 633 bp |
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| Protein Length | 210 aa |
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| Translation table | 11 |
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| GC content | 60% |
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| IMG OID | 638010838 |
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| Product | two component LuxR family transcriptional regulator |
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| Protein accession | YP_617500 |
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| Protein GI | 103487939 |
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| COG category | [T] Signal transduction mechanisms |
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| COG ID | [COG4566] Response regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 28 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 11 |
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| Fosmid unclonability p-value | 0.475025 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCAGGATA AGCGCCTCAT TCATCTGGTC GATGACGAAG AGGCCATCCG GAAGTCAGCC
GGATTCATGC TGCGGACGGT GGGGTTCGAG GTACGGACCT ATGCGAGCGG CGTGGAATTT
CTGAAGCTGG CACGCACGGC CGAGACTGGA TGTGTGCTTC TCGACGTTCG CATGCCTGAG
TTAGATGGGC TTCAGGTCCA GTCGGAAATG GCGCAGCGCG GCATCAATAT GCCGGTCGTC
GTCCTGACCG GTCATGGCGA CGTCACTCTC GCGGTGCAGG CGATGAAGGC GGGCGCAGTG
GATTTTATCG AGAAACCCTT CGAGAAGGCA TCGCTGCTTG AGGCTATCGA CCGCGGATTC
GCGCGTATCG ACCGGGTCGA TGTCCGAGCG ACGGAAGAAG CCGAAGCGCA GGTCCGGATC
GGCGTCTTGA CGCCCCGCGA GAAGGAGGTT CTCGATGGGC TCGCGCGAGG CTATCCCAAC
AAGACCATCG CCTATGATCT AGGCGTTTCT TCGCGAACCG TCGAAGTCCA CCGGGCAAGC
CTGATGAGCA AGTTGGCTGT CCGCAGTCTT TCCGATGCGC TCCGGATTGC ATTTGCTGCG
GGCCTTGGTC GCAGCGAAGC CAAACTGGGA TGA
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| Protein sequence | MQDKRLIHLV DDEEAIRKSA GFMLRTVGFE VRTYASGVEF LKLARTAETG CVLLDVRMPE
LDGLQVQSEM AQRGINMPVV VLTGHGDVTL AVQAMKAGAV DFIEKPFEKA SLLEAIDRGF
ARIDRVDVRA TEEAEAQVRI GVLTPREKEV LDGLARGYPN KTIAYDLGVS SRTVEVHRAS
LMSKLAVRSL SDALRIAFAA GLGRSEAKLG
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