Gene Sala_2419 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2419 
Symbol 
ID4080857 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2557098 
End bp2557622 
Gene Length525 bp 
Protein Length174 aa 
Translation table11 
GC content63% 
IMG OID638010798 
Producthypothetical protein 
Protein accessionYP_617460 
Protein GI103487899 
COG category[R] General function prediction only 
COG ID[COG3019] Predicted metal-binding protein 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones43 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.709936 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGAAAAATC TGATGACGCG CCGTCATCTT TTCGGCCTGA TTGCGGTCGG ATCGGGGATG 
GCGCTTGCGG CATGCAATTC TGCCTCGGGC CCGGCGGCGA CCAGCGATAA GAATGGCGCG
GCGCCCGCGC CGGGCGCCGA GACGTCCAGC CCCAAGCGAA TGCTCGTTTA TCGCGATCCC
GAATGCGGCT GCTGCGAAGC TTGGGCGGAT ATCGCACGCA AGGCCGGTTA TGATGTGACT
GTCGAGAACC GCGCTGACAT GGCCGCCGTA AAGACGCGAT ATGGTGTGCC TGGCCAGCTG
GCGTCGTGCC ACACGGCCGT GATCGGCGGC TATGCGATCG AGGGTCATGT GCCGATGCGG
CATGTTGCGA GACTCCTCCA CGACAAGCCA CGCGACATTC GCGGAATCGC CGTGCCCGGC
ATGCCGCGCG GTTCTCCGGG AATGGAAATG CCGGACGGAA GCGCGGACGC ATTCGAAGTG
ATGGCATTCG GCAGCGACGG CAAGGTTTCT GAATTCCGCG CATGA
 
Protein sequence
MKNLMTRRHL FGLIAVGSGM ALAACNSASG PAATSDKNGA APAPGAETSS PKRMLVYRDP 
ECGCCEAWAD IARKAGYDVT VENRADMAAV KTRYGVPGQL ASCHTAVIGG YAIEGHVPMR
HVARLLHDKP RDIRGIAVPG MPRGSPGMEM PDGSADAFEV MAFGSDGKVS EFRA