Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2314 |
Symbol | |
ID | 4080599 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 2442298 |
End bp | 2443506 |
Gene Length | 1209 bp |
Protein Length | 402 aa |
Translation table | 11 |
GC content | 68% |
IMG OID | 638010694 |
Product | peptidase M20D, amidohydrolase |
Protein accession | YP_617356 |
Protein GI | 103487795 |
COG category | [R] General function prediction only |
COG ID | [COG1473] Metal-dependent amidase/aminoacylase/carboxypeptidase |
TIGRFAM ID | [TIGR01891] amidohydrolase |
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Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.63249 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGGACAATT CATCGCATAG CTGGCCCGCC GAGGCCGAAA CCCTCCTCGA CGACCTTGTC GACCTGCGCC GCGCGATTCA TCGCGAGCCG GAGCTGGGCC TCCAGAACCC CAGGACGCTC GCCAAGATCA AGGACGCGCT CGCAGGGTTG CCGCTCGAGT TTCGCGAGGG GCCCTCGACG ACCGGGCTGG TCGCGATCCT GCGCGGGCCC GCGAACGGGC GCACCGTGCT GCTGCGCGGC GACATGGATG CGCTGCCGCT CGTCGAGGAC ACCGGGCTCG ATTTCGCGTC CGAAACGACC GGCGCGATGC ATGCGTGCGG GCACGACACG CATGTCGCGA TGCTGGTCGG CGCGGCGAAG CTGCTCTGCG CGGCGCGCGA CCGCTTGCCC GGCACCGTCC TGTTCATGTT CCAGCCGGGC GAAGAAGGCC ATCATGGCGC GCGCTTCATG CTGGACGACG GGCTGATCGA CCCGCTGCCC GACGCCGCCT TTGCGCTCCA CATCATGCCC AACGCGCCGC ACGGCATCTT TGCCGGGCGC GCGGGGCCGC TGCTCGCCTC GTCGGATGTC CTCTCGATTA CCGTCAAGGG CGCGGGCGGG CACGCTTCGA TGCCGCACGA TGCGGTCGAT CCGATCCCCG TCGCCTGCGC GATCGTCACC GCGATCCAGA CGATGGTGAC GCGACGCATT TCGGTGTTCG ATCCCGCGGT TGTCACGATC GCGAAGATCA CTGCCGGGAC CACGAACAAC ATCATCCCCG AGACCGCCGA GATGCTGGGC ACGATCCGCA CCCTGTCACC CGAACGCCGC GCCATGGTCG CGCGCGAGCT GAATCGCCTC GCTCCCGCAA TCGCCGAAGC GCATGGCTGC ACCGCCGAGG TCCATATCGA GGAAGGTTTC CCCGTCACCA TCTGCGACAG CCGCGCCGCC GCCTTCGGTC AGCGCGTCGT CGAGAATGTG TTCGGCGAAG CGGCGTGGCT GACGATGGAC AATCCGGTGA TGGGCGCCGA GGATTTCGCC TATGTCCTCG AAAAAGTCCC CGGCGCGATG TTCTGGCTCG GCGCCAGCCA CGCAGGCAGC GACTGGCGCC AATGCTGCGG CCTGCACAGC AACCGCATGG TGCTGGACGA AAAGGTCATG GCGCGCGGCG CGGCGCTGCA CGCAGCGCTG GCAGAACGGT TTTTGAACGA GGGGTTCGGG CAGGAATAG
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Protein sequence | MDNSSHSWPA EAETLLDDLV DLRRAIHREP ELGLQNPRTL AKIKDALAGL PLEFREGPST TGLVAILRGP ANGRTVLLRG DMDALPLVED TGLDFASETT GAMHACGHDT HVAMLVGAAK LLCAARDRLP GTVLFMFQPG EEGHHGARFM LDDGLIDPLP DAAFALHIMP NAPHGIFAGR AGPLLASSDV LSITVKGAGG HASMPHDAVD PIPVACAIVT AIQTMVTRRI SVFDPAVVTI AKITAGTTNN IIPETAEMLG TIRTLSPERR AMVARELNRL APAIAEAHGC TAEVHIEEGF PVTICDSRAA AFGQRVVENV FGEAAWLTMD NPVMGAEDFA YVLEKVPGAM FWLGASHAGS DWRQCCGLHS NRMVLDEKVM ARGAALHAAL AERFLNEGFG QE
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