Gene Sala_2274 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2274 
Symbol 
ID4080731 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2393954 
End bp2395954 
Gene Length2001 bp 
Protein Length666 aa 
Translation table11 
GC content63% 
IMG OID638010653 
Producthypothetical protein 
Protein accessionYP_617316 
Protein GI103487755 
COG category 
COG ID 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones13 
Plasmid unclonability p-value0.378789 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.805615 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCGAGGGA CCTGGATCAG CCGGCTGTGC GCCGGCACCA AATCGCTCAT AAGCGACCAG 
CGCGGCAACG CCTTCATGCT GACCGCCGCG GCGATCATCC CGGTGATCGG CTTTGTCGGT
TCGGCGGTCG ACATCGGCCG CGCCTATATG ACGCAATTGC GTTTGCAGCA GGCCTGCGAT
GCCGGCGTGC TCGCCGGGCG CCGCGCGATG GGCGGCGCCA GCTATGACGA AGCGGCGCAG
GCCGAAGCGA ACAAGATGTT CAACTTCAAC TTCCCCGAAG CCAAATATGG CGCGACGGGC
ATTCTCTTTT CGTCGCGTGC GCTCAATGCC TCCGACGTCG AGGGACAGGC CTCGGCGGTG
CTGCCGACCG AGCTGATGTT CATGTTCGGC AAGGAGGAGT TCCGCCTGTC GGCCGATTGC
ACCGCAAAGC TCGAAATCTC GAACGTCGAT GTCATGCTGG TGCTCGACGT CACCGGGTCG
ATGGCGCAGA CCAACGCGGG CGACTCGGTC AACCGCATCA CCGCGCTCAA AGACGCGACG
ATGGACTTTT TCGACACGCT GACCAACGCC GATGTCGGCG ACGGGCGGCT GCGCTTTGGC
GTCGTGCCCT ATAGTTCGAC CGCGAATGTC GGCCAGATTC TTCTCGCGAA AAATCCGGCG
TGGTTGGCCG ATACGGTCAC GCTGCCGTCG CGGACGCCCA TTTTCCGCGA AGTTTATACC
GAGACGGGAA CCGAGACGAG CGACGACTAT ACCGACAGTC CGACGACCTA TTCGTCAAAC
TGGACCAATG ACGGCACCGT ACCGGCAAGC AACAGCGCGG CCTGCGCGGC GCTGACGCCG
CCGGCAAACA CCACGCCGTC TCCGAGCGGA TCGCCGGACT ATAACCAGAC GGGCCAATAT
GTCGACGGCG ACACGCGCGT CACGACCTAT GACACCGTTC AAACCTACAC CTTCCGTACC
TATCGTTACG TCTGGTCCAG CAACCGGTGC CGCAGGCAGT ATCGCAACGG CAATTTCACG
CGCACCTATA CCACGACGGT CACCGAAACG AAGACCGACG TTTTCGACAA TAAATACACC
TATGAGGACC GCGTTTTCGA CGTCAGCGGG GTGAAGAGCG GTTCGGCGAT CGTCACCGAC
ACCGGCGATT CGGGAGTCAG CATCAGCCAT AACTGGGGCG GGTGCCTGAT CGAACGGGCA
ACGACCCCGT TCGACGCCGA CGACACCGCG CCGTCGGACG CGCTAGACAT GGATATCGAC
CTGGTGCCCG ACGCCGATGC CGATACGCAA TGGCGGATCC TGATCCCCGA GATCGCCTTT
CCGCGCGCGC GCCACCCCCA ATATGCGCCG TCCAGCAGCG ATCCGATGAC GGTCAACGTG
TTCAACAGCG ATGGCACCCG GAACATCACG TCGGACACGA GTTCAAACGG TCGCTGGCAG
CGTTATTCCA AATATTGGGG CAGTGGCTGG GGCGTCTGCC CGGCGGCAGC GATGAAGCTG
ACGACGATGA CGGCCAGCGA CCGCGCAACC TTCAACACCT ATGTCCAGTC GCTGCAACCG
CTGGGCGGCA CCTATCACGA CGCCGGCATG GTCTGGGGCG CGCGGCTGTT GTCGCCGACC
GGGCTGTTCG CCGACGAAAA TGCGACGGCG CCGAACGATC GCCCGATCAG CCGCCATATC
GTCTTCATGA CCGACGGCGC CATGGCGCCG AACATGGGTA ATCTGACCTT CCAGGGCTAT
GAGTTTCTGA TGCACCGCGT CGGCGGGACG AGCGACAGCG ATCTGCGCGA CCGCCACAAT
AACCGCTTCA CGCAATTGTG CCGGGCGGCG CGGCAGCGCG GGATCACCAT CTGGGTCGTG
TCCTTCGGGG TCGGCAGCAA CGACAGCCTG AACAACTGCG CGTCGTCGGG CCAGGCGTTC
GAGGCCGACA ATGCCGCCGA ACTCAACGAA CAGTTCCAGG CGATCGCGCG GCAGATTTCC
AAGCTGAGGC TGGCGCAATG A
 
Protein sequence
MRGTWISRLC AGTKSLISDQ RGNAFMLTAA AIIPVIGFVG SAVDIGRAYM TQLRLQQACD 
AGVLAGRRAM GGASYDEAAQ AEANKMFNFN FPEAKYGATG ILFSSRALNA SDVEGQASAV
LPTELMFMFG KEEFRLSADC TAKLEISNVD VMLVLDVTGS MAQTNAGDSV NRITALKDAT
MDFFDTLTNA DVGDGRLRFG VVPYSSTANV GQILLAKNPA WLADTVTLPS RTPIFREVYT
ETGTETSDDY TDSPTTYSSN WTNDGTVPAS NSAACAALTP PANTTPSPSG SPDYNQTGQY
VDGDTRVTTY DTVQTYTFRT YRYVWSSNRC RRQYRNGNFT RTYTTTVTET KTDVFDNKYT
YEDRVFDVSG VKSGSAIVTD TGDSGVSISH NWGGCLIERA TTPFDADDTA PSDALDMDID
LVPDADADTQ WRILIPEIAF PRARHPQYAP SSSDPMTVNV FNSDGTRNIT SDTSSNGRWQ
RYSKYWGSGW GVCPAAAMKL TTMTASDRAT FNTYVQSLQP LGGTYHDAGM VWGARLLSPT
GLFADENATA PNDRPISRHI VFMTDGAMAP NMGNLTFQGY EFLMHRVGGT SDSDLRDRHN
NRFTQLCRAA RQRGITIWVV SFGVGSNDSL NNCASSGQAF EADNAAELNE QFQAIARQIS
KLRLAQ