Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2274 |
Symbol | |
ID | 4080731 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 2393954 |
End bp | 2395954 |
Gene Length | 2001 bp |
Protein Length | 666 aa |
Translation table | 11 |
GC content | 63% |
IMG OID | 638010653 |
Product | hypothetical protein |
Protein accession | YP_617316 |
Protein GI | 103487755 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 13 |
Plasmid unclonability p-value | 0.378789 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 0.805615 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGAGGGA CCTGGATCAG CCGGCTGTGC GCCGGCACCA AATCGCTCAT AAGCGACCAG CGCGGCAACG CCTTCATGCT GACCGCCGCG GCGATCATCC CGGTGATCGG CTTTGTCGGT TCGGCGGTCG ACATCGGCCG CGCCTATATG ACGCAATTGC GTTTGCAGCA GGCCTGCGAT GCCGGCGTGC TCGCCGGGCG CCGCGCGATG GGCGGCGCCA GCTATGACGA AGCGGCGCAG GCCGAAGCGA ACAAGATGTT CAACTTCAAC TTCCCCGAAG CCAAATATGG CGCGACGGGC ATTCTCTTTT CGTCGCGTGC GCTCAATGCC TCCGACGTCG AGGGACAGGC CTCGGCGGTG CTGCCGACCG AGCTGATGTT CATGTTCGGC AAGGAGGAGT TCCGCCTGTC GGCCGATTGC ACCGCAAAGC TCGAAATCTC GAACGTCGAT GTCATGCTGG TGCTCGACGT CACCGGGTCG ATGGCGCAGA CCAACGCGGG CGACTCGGTC AACCGCATCA CCGCGCTCAA AGACGCGACG ATGGACTTTT TCGACACGCT GACCAACGCC GATGTCGGCG ACGGGCGGCT GCGCTTTGGC GTCGTGCCCT ATAGTTCGAC CGCGAATGTC GGCCAGATTC TTCTCGCGAA AAATCCGGCG TGGTTGGCCG ATACGGTCAC GCTGCCGTCG CGGACGCCCA TTTTCCGCGA AGTTTATACC GAGACGGGAA CCGAGACGAG CGACGACTAT ACCGACAGTC CGACGACCTA TTCGTCAAAC TGGACCAATG ACGGCACCGT ACCGGCAAGC AACAGCGCGG CCTGCGCGGC GCTGACGCCG CCGGCAAACA CCACGCCGTC TCCGAGCGGA TCGCCGGACT ATAACCAGAC GGGCCAATAT GTCGACGGCG ACACGCGCGT CACGACCTAT GACACCGTTC AAACCTACAC CTTCCGTACC TATCGTTACG TCTGGTCCAG CAACCGGTGC CGCAGGCAGT ATCGCAACGG CAATTTCACG CGCACCTATA CCACGACGGT CACCGAAACG AAGACCGACG TTTTCGACAA TAAATACACC TATGAGGACC GCGTTTTCGA CGTCAGCGGG GTGAAGAGCG GTTCGGCGAT CGTCACCGAC ACCGGCGATT CGGGAGTCAG CATCAGCCAT AACTGGGGCG GGTGCCTGAT CGAACGGGCA ACGACCCCGT TCGACGCCGA CGACACCGCG CCGTCGGACG CGCTAGACAT GGATATCGAC CTGGTGCCCG ACGCCGATGC CGATACGCAA TGGCGGATCC TGATCCCCGA GATCGCCTTT CCGCGCGCGC GCCACCCCCA ATATGCGCCG TCCAGCAGCG ATCCGATGAC GGTCAACGTG TTCAACAGCG ATGGCACCCG GAACATCACG TCGGACACGA GTTCAAACGG TCGCTGGCAG CGTTATTCCA AATATTGGGG CAGTGGCTGG GGCGTCTGCC CGGCGGCAGC GATGAAGCTG ACGACGATGA CGGCCAGCGA CCGCGCAACC TTCAACACCT ATGTCCAGTC GCTGCAACCG CTGGGCGGCA CCTATCACGA CGCCGGCATG GTCTGGGGCG CGCGGCTGTT GTCGCCGACC GGGCTGTTCG CCGACGAAAA TGCGACGGCG CCGAACGATC GCCCGATCAG CCGCCATATC GTCTTCATGA CCGACGGCGC CATGGCGCCG AACATGGGTA ATCTGACCTT CCAGGGCTAT GAGTTTCTGA TGCACCGCGT CGGCGGGACG AGCGACAGCG ATCTGCGCGA CCGCCACAAT AACCGCTTCA CGCAATTGTG CCGGGCGGCG CGGCAGCGCG GGATCACCAT CTGGGTCGTG TCCTTCGGGG TCGGCAGCAA CGACAGCCTG AACAACTGCG CGTCGTCGGG CCAGGCGTTC GAGGCCGACA ATGCCGCCGA ACTCAACGAA CAGTTCCAGG CGATCGCGCG GCAGATTTCC AAGCTGAGGC TGGCGCAATG A
|
Protein sequence | MRGTWISRLC AGTKSLISDQ RGNAFMLTAA AIIPVIGFVG SAVDIGRAYM TQLRLQQACD AGVLAGRRAM GGASYDEAAQ AEANKMFNFN FPEAKYGATG ILFSSRALNA SDVEGQASAV LPTELMFMFG KEEFRLSADC TAKLEISNVD VMLVLDVTGS MAQTNAGDSV NRITALKDAT MDFFDTLTNA DVGDGRLRFG VVPYSSTANV GQILLAKNPA WLADTVTLPS RTPIFREVYT ETGTETSDDY TDSPTTYSSN WTNDGTVPAS NSAACAALTP PANTTPSPSG SPDYNQTGQY VDGDTRVTTY DTVQTYTFRT YRYVWSSNRC RRQYRNGNFT RTYTTTVTET KTDVFDNKYT YEDRVFDVSG VKSGSAIVTD TGDSGVSISH NWGGCLIERA TTPFDADDTA PSDALDMDID LVPDADADTQ WRILIPEIAF PRARHPQYAP SSSDPMTVNV FNSDGTRNIT SDTSSNGRWQ RYSKYWGSGW GVCPAAAMKL TTMTASDRAT FNTYVQSLQP LGGTYHDAGM VWGARLLSPT GLFADENATA PNDRPISRHI VFMTDGAMAP NMGNLTFQGY EFLMHRVGGT SDSDLRDRHN NRFTQLCRAA RQRGITIWVV SFGVGSNDSL NNCASSGQAF EADNAAELNE QFQAIARQIS KLRLAQ
|
| |