Gene Sala_2222 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2222 
Symbol 
ID4080293 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2333868 
End bp2334773 
Gene Length906 bp 
Protein Length301 aa 
Translation table11 
GC content68% 
IMG OID638010600 
Productalpha/beta hydrolase fold 
Protein accessionYP_617264 
Protein GI103487703 
COG category[R] General function prediction only 
COG ID[COG0596] Predicted hydrolases or acyltransferases (alpha/beta hydrolase superfamily)  
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones20 
Plasmid unclonability p-value0.801481 
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones12 
Fosmid unclonability p-value0.877247 
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
ATGCAGACCG AACAGGCGGC CGTGAACGGC ATCGACATCA CCTATGAGGA TCGCGGGCCG 
AAGGACGCGC CCGCCATCCT GTTGGTGATG GGGCTGGGCG GACAGTTGAC GCTGTGGCCC
GACGAGTTCG TCGCGGCGTT GAACGACCGG GGGTTCCGCA CGATCCGCTA TGACAATCGC
GACGTCGGTC TGTCGACGCG CTTCGACGCG GCAGGGGTGC CGAACCTCAA ATGGATGTTC
GTCAAGGCGG CGATCGGCCT GCCGGTGCGC CCCGCCTATA CGCTCGCCGA CATGGCCGCC
GACGGCCTCG GCCTGCTCGA CCATCTGGGC ATCGGACGGG CCCATATCGT CGGGGTGTCG
ATGGGGGGCA TGATTTCGCA GCATATCGCC GCGCGCTATC CGGACCGCGT GCTTTCGCTC
ACCTCGATCA TGTCGACGAC GGGCAACCGC CGCCTGCCGA AAGCGCGCAA GGAAGCGATG
CAGGCGCTCG CCAACCGCCC GATGAGCGGC GACAAGGAGG CGCTGATTGC CTATGGGGTG
AAGGCGGCGC GGGTGATCGG CAGCCCCGGC TATCCGTCCG ACGAGGAGCG GCTTCAGCGC
CGCGTCCGCG CCGATTTCGA GCGCGGCTGG TATCCGCCGG GCTTTGCGCG GCAGATGGCG
GCGATCATCG CCGATGGCGA CCGGCGGCCG ATGCTGAAGT CGATCAAGGC GCCGACGCTG
GTGATTCACG GCGAGGACGA TCCGCTGGTG CCGCTCGCGG GAGGGCGCGA CACGGCGGCC
CATATCGCGG GCGCGCGGCT GCTGACGATC CCCGGCATGG GGCATGACCT GCCGCTGGCG
CTTGTCGATA CGCTCGCCGA TGCGATCGCG GGACATATTG GGGAGGAGGT TGCCGTCGCT
GCCTGA
 
Protein sequence
MQTEQAAVNG IDITYEDRGP KDAPAILLVM GLGGQLTLWP DEFVAALNDR GFRTIRYDNR 
DVGLSTRFDA AGVPNLKWMF VKAAIGLPVR PAYTLADMAA DGLGLLDHLG IGRAHIVGVS
MGGMISQHIA ARYPDRVLSL TSIMSTTGNR RLPKARKEAM QALANRPMSG DKEALIAYGV
KAARVIGSPG YPSDEERLQR RVRADFERGW YPPGFARQMA AIIADGDRRP MLKSIKAPTL
VIHGEDDPLV PLAGGRDTAA HIAGARLLTI PGMGHDLPLA LVDTLADAIA GHIGEEVAVA
A