Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2182 |
Symbol | |
ID | 4080216 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 2292062 |
End bp | 2292763 |
Gene Length | 702 bp |
Protein Length | 233 aa |
Translation table | 11 |
GC content | 64% |
IMG OID | 638010560 |
Product | peptidase M23B |
Protein accession | YP_617224 |
Protein GI | 103487663 |
COG category | [M] Cell wall/membrane/envelope biogenesis |
COG ID | [COG0739] Membrane proteins related to metalloendopeptidases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 25 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 14 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | TTGAGTAACA TTCTACTGGC GCAAAAGTTG CACCACATCG CAATTTTCTG CGTGGCAGCC TGTTTCGCCA CGGCCACGTC GGCCGTCCAC GCCGCCGAAA CCAGCGCCGA CGCTGGTATC ATCGTTCCCG ACGAACCCGA TGACGACAGC TTCACCGCCG GCGTTCCGGC GACCGGCGAA GACAGCGAGG CGCGCGCAAT CTTTCAGGCG TGGAAGCGCC TCGACACCGG CCTGACCGCC TCGATCGGCG TCGCGGTGCC CTCGCGCCGC CCGATCGACC AGATGTCGCT CTCCTCGTCT TACGGGATGC GCGTCCATCC GATCACCGGC AGGGTCGCGC GCCACAATGG CATCGACATC CCGGCGCCGC ACGGCACCCC GATCTACGCG ACCGCCGACG GCATCGTCGG CCGCGCCCAG CGGCTGGGCG GCTATGGCAA TTATGTCGAA ATCGAACATG GCAATGCGAT CCAGACGCGC TACGGCCATA TGTCGTCCTA TGTCGTGCGT CCCGGACAAC AGGTCAAAAA GGGCGAAATC ATCGGTTATG TCGGCTCGAC GGGCCGCTCG ACCGGCAATC ATCTCCATTA TGAAGTCCGC ATCGAAGGCG CGCCGGTCAA TCCGATGCCC TTCGTGCGGT CGGACCAGAT GGCGATCGCC GCGATCAGCG GAAAAAATGT CGCGATGGGC GGTCCTGAAT AG
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Protein sequence | MSNILLAQKL HHIAIFCVAA CFATATSAVH AAETSADAGI IVPDEPDDDS FTAGVPATGE DSEARAIFQA WKRLDTGLTA SIGVAVPSRR PIDQMSLSSS YGMRVHPITG RVARHNGIDI PAPHGTPIYA TADGIVGRAQ RLGGYGNYVE IEHGNAIQTR YGHMSSYVVR PGQQVKKGEI IGYVGSTGRS TGNHLHYEVR IEGAPVNPMP FVRSDQMAIA AISGKNVAMG GPE
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