Gene Sala_2182 details

Gene Information       Plasmid Coverage information       Fosmid Coverage information       Sequence       

Gene Information

Locus tagSala_2182 
Symbol 
ID4080216 
TypeCDS 
Is gene splicedNo 
Is pseudo geneNo 
Organism nameSphingopyxis alaskensis RB2256 
KingdomBacteria 
Replicon accessionNC_008048 
Strand
Start bp2292062 
End bp2292763 
Gene Length702 bp 
Protein Length233 aa 
Translation table11 
GC content64% 
IMG OID638010560 
Productpeptidase M23B 
Protein accessionYP_617224 
Protein GI103487663 
COG category[M] Cell wall/membrane/envelope biogenesis 
COG ID[COG0739] Membrane proteins related to metalloendopeptidases 
TIGRFAM ID 


Plasmid Coverage information

Num covering plasmid clones25 
Plasmid unclonability p-value
Plasmid hitchhikingNo 
Plasmid clonabilitynormal 
 

Fosmid Coverage information

Num covering fosmid clones14 
Fosmid unclonability p-value
Fosmid HitchhikerNo 
Fosmid clonabilitynormal 
 

Sequence

Gene sequence
TTGAGTAACA TTCTACTGGC GCAAAAGTTG CACCACATCG CAATTTTCTG CGTGGCAGCC 
TGTTTCGCCA CGGCCACGTC GGCCGTCCAC GCCGCCGAAA CCAGCGCCGA CGCTGGTATC
ATCGTTCCCG ACGAACCCGA TGACGACAGC TTCACCGCCG GCGTTCCGGC GACCGGCGAA
GACAGCGAGG CGCGCGCAAT CTTTCAGGCG TGGAAGCGCC TCGACACCGG CCTGACCGCC
TCGATCGGCG TCGCGGTGCC CTCGCGCCGC CCGATCGACC AGATGTCGCT CTCCTCGTCT
TACGGGATGC GCGTCCATCC GATCACCGGC AGGGTCGCGC GCCACAATGG CATCGACATC
CCGGCGCCGC ACGGCACCCC GATCTACGCG ACCGCCGACG GCATCGTCGG CCGCGCCCAG
CGGCTGGGCG GCTATGGCAA TTATGTCGAA ATCGAACATG GCAATGCGAT CCAGACGCGC
TACGGCCATA TGTCGTCCTA TGTCGTGCGT CCCGGACAAC AGGTCAAAAA GGGCGAAATC
ATCGGTTATG TCGGCTCGAC GGGCCGCTCG ACCGGCAATC ATCTCCATTA TGAAGTCCGC
ATCGAAGGCG CGCCGGTCAA TCCGATGCCC TTCGTGCGGT CGGACCAGAT GGCGATCGCC
GCGATCAGCG GAAAAAATGT CGCGATGGGC GGTCCTGAAT AG
 
Protein sequence
MSNILLAQKL HHIAIFCVAA CFATATSAVH AAETSADAGI IVPDEPDDDS FTAGVPATGE 
DSEARAIFQA WKRLDTGLTA SIGVAVPSRR PIDQMSLSSS YGMRVHPITG RVARHNGIDI
PAPHGTPIYA TADGIVGRAQ RLGGYGNYVE IEHGNAIQTR YGHMSSYVVR PGQQVKKGEI
IGYVGSTGRS TGNHLHYEVR IEGAPVNPMP FVRSDQMAIA AISGKNVAMG GPE