Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_2177 |
Symbol | |
ID | 4080211 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | + |
Start bp | 2287181 |
End bp | 2288281 |
Gene Length | 1101 bp |
Protein Length | 366 aa |
Translation table | 11 |
GC content | 65% |
IMG OID | 638010555 |
Product | permease YjgP/YjgQ |
Protein accession | YP_617219 |
Protein GI | 103487658 |
COG category | [R] General function prediction only |
COG ID | [COG0795] Predicted permeases |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 30 |
Plasmid unclonability p-value | 1 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 12 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGCACCAGC TTCATTTCTT TCCCTCGCGC ACCATGGCGC TCTATGTCGG GCGGCTGTTC CTGTTCCGCA CCTTTGCGAT CCTTTTTGCG CTCGTGCTGA TCCTCCAGAC GCTCGACCTG CTCGGCGAAA GCGGCAAGAT CCTGGCCGTT CCGGGCAACG GCGACAGCGA CGTATGGCGC TATGTCGGAA TGCGGATGCC GCAGATCATC GAGACCTTCC TGCCCTTTTC GGTGCTGCTC GGCACGATAT TGACGATGGT GACGCTCAAC CAGAACAGCG AGGTCGTCGC GATGAAGGCG GCGGGCATGT CGGCGCATCA GGTGCTCGCG CCGCTGTTCC TCGCGGCGCT GCTGGTCGCG GGGATCAGCT TTGCCTTCAA CGAACGCATC GTCACGCGCT CGACCGCGGC GCTCGGCGCC TGGCAAAAGG TCGAATACAA GCGCGTTCCT GTCGACAGCG GGGTGCGCAG CAACATCTGG GTGCGCGACG GCGACGATCT GATCAACGCC GAAACGGTCG AGACGTCGGG GCCCGCGGTC GTGCTGCGCG GCGTCACCAT CTATGAACGC ACGCGCGGCG TCCTGTCGTC GATGCTGTCG GCCGACAGCG CGCGCGCGCT GCCCGGCGGT GGATGGGAAA TGGCGAACGC GCGGCGCTTC TCGCGCCGAT CGGGAACACT CGAACCGCTG GGCACGATCG TTGCGGCACC AAATGTGCGC CCCGACCAGT TCACGCTCGC CGACGTCGAC GGCGACGAAC TGCCCTTCCT GAAGCTGAAG GCGGCGATCG ACGACCTCGA AGCCGCGGGG CGCCCGGTCG ATGCGCTGAA GGGCGTGCTG TGGCACAAGA TTTCGGGGCC GCTGTCGGCG ATCTTGATGC CGCTGCTCGG CGCCGTCGCG GCGTTCGGGC TGGCGCGATC GGGCAAGCTG TTCGTGCGCG CGATCATCGG CATGGCGCTG GGCTTCGCCT ATTTCGTCGC CGACAATTTC GCGCTGGCGA TGGGCGATCT GGGCGCTTAC TCGCCGTTTC TGGCGGCGTG GGGTCCGTTC ATCCTGTTCG CGCTGATCGG CGAGATGATT TTGATCAGGA CTGAGGAATA G
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Protein sequence | MHQLHFFPSR TMALYVGRLF LFRTFAILFA LVLILQTLDL LGESGKILAV PGNGDSDVWR YVGMRMPQII ETFLPFSVLL GTILTMVTLN QNSEVVAMKA AGMSAHQVLA PLFLAALLVA GISFAFNERI VTRSTAALGA WQKVEYKRVP VDSGVRSNIW VRDGDDLINA ETVETSGPAV VLRGVTIYER TRGVLSSMLS ADSARALPGG GWEMANARRF SRRSGTLEPL GTIVAAPNVR PDQFTLADVD GDELPFLKLK AAIDDLEAAG RPVDALKGVL WHKISGPLSA ILMPLLGAVA AFGLARSGKL FVRAIIGMAL GFAYFVADNF ALAMGDLGAY SPFLAAWGPF ILFALIGEMI LIRTEE
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