| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1959 |
|---|
| Symbol | tsf |
|---|
| ID | 4080508 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 2065409 |
|---|
| End bp | 2066335 |
|---|
| Gene Length | 927 bp |
|---|
| Protein Length | 308 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638010336 |
|---|
| Product | elongation factor Ts |
|---|
| Protein accession | YP_617004 |
|---|
| Protein GI | 103487443 |
|---|
| COG category | [J] Translation, ribosomal structure and biogenesis |
|---|
| COG ID | [COG0264] Translation elongation factor Ts |
|---|
| TIGRFAM ID | [TIGR00116] translation elongation factor Ts |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 24 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 20 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | ATGGCTGAAA TCACGGCCGC CCTCGTCAAG GAACTGCGCG ACCGCACCGG CGCGGGCATG
ATGGACTGCA AGAAGGCGCT CGCCGAGAAC AACGGCGACA TCGAGGCGTC GATCGACTGG
CTGCGCACCA AGGGCCTTGC CGCCGCCGCC AAAAAGGCCG GCCGCGTCGC CGCCGAAGGC
CTGGTCGGTT TCGCGACCGA CGGCACCAGG GGCGCGCTCG TCGAAGTGAA CAGCGAAACC
GACTTCGTCG GCAAGAATGA GCAATTCCAG GCGTTCGTTC GCGACGTGAC GCAGGTTGCG
CTCGCGGAGG GCATCACCGA CATCGACGCG CTCGCCGCCG CACCCTATCC GACCGGGGGC
ACCGTTGCCG AACAGCTGAC CAGCAACATC GCGACGATCG GCGAAAACCA GTCGTTGCGC
CGCGTCGCCC TGCTGACGGT GAACTCGGGC GCCGTGACCG GCTATGTCCA CAACGCCGCC
GCGCCCGGCA TGGGCAAGAT CGGCGTGCTC GTCGCGCTCG AATCGAGCGC CGGTGCCGAC
GTGCTCGAAC CGCTCGGCAA GCAGCTGGCT ATGCACGTCG CCGCCGCAAA CCCGCTGGCG
CTGAACGGCG ATGACCTCGA CGCCGACCTC GTCGCGCGCG AACGCGCGAT CGCCGAGGAA
AAGGCCGCCC AGTCGGGCAA GCCGGCCGAG ATCGTCGCCA AGATGGTCGA TGGAGCGATT
GCCAAGTTCC GCAAGGAAAA TGCGCTGTTG TCGCAGCTGT TCGTGATGGA CGGCAAGACG
CCGGTCGCCG AAGTCGTCGC CGCCGCCGGC AAGGATGTCG GCGCCGCGAT AACGCTCAAG
GGCTTCGTCC GCTTCCAGCT CGGTGAAGGC ATCGAGAAGG AAGAAAGCGA TTTCGCGGCG
GAAGTCGCGG CTGCCGCCGG CGTCTAA
|
|---|
| Protein sequence | MAEITAALVK ELRDRTGAGM MDCKKALAEN NGDIEASIDW LRTKGLAAAA KKAGRVAAEG
LVGFATDGTR GALVEVNSET DFVGKNEQFQ AFVRDVTQVA LAEGITDIDA LAAAPYPTGG
TVAEQLTSNI ATIGENQSLR RVALLTVNSG AVTGYVHNAA APGMGKIGVL VALESSAGAD
VLEPLGKQLA MHVAAANPLA LNGDDLDADL VARERAIAEE KAAQSGKPAE IVAKMVDGAI
AKFRKENALL SQLFVMDGKT PVAEVVAAAG KDVGAAITLK GFVRFQLGEG IEKEESDFAA
EVAAAAGV
|
|---|
| |