Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1930 |
Symbol | |
ID | 4082879 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 2035614 |
End bp | 2037146 |
Gene Length | 1533 bp |
Protein Length | 510 aa |
Translation table | 11 |
GC content | 69% |
IMG OID | 638010307 |
Product | AMP-dependent synthetase and ligase |
Protein accession | YP_616975 |
Protein GI | 103487414 |
COG category | [I] Lipid transport and metabolism [Q] Secondary metabolites biosynthesis, transport and catabolism |
COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
TIGRFAM ID | [TIGR01733] amino acid adenylation domain [TIGR03098] acyl-CoA ligase (AMP-forming), exosortase system type 1 associated |
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Plasmid Coverage information |
Num covering plasmid clones | 15 |
Plasmid unclonability p-value | 0.426512 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 22 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGACCACGC CCGAAAACCC CGTGTCGCAG CCCATCGACC ATCTCGCCCG CCGCGGCGCG CCGGATGCGG CTGCGCTGCT GATCGGCGAA CGGGTGGTGA CCTATGCCGA ACTCGACGCG GGGGTGGGAC TGCTTGCGGC GTGGCTACGC GAACAGGCCG GCGGTCCCGG CGAGCGCGTC GCGAGCTGGA GTGCGAAGAC CCGGCTCGCC TGTCTGATGC CGCTCGCCGC GGCGCGCGCG GGGCTGATCC ATGTGCCGAT CAATCCGCTG CTCAAGGGGC CGCAGGCGCA GCATATCCTG GCCGACAGCG GCGCGAAGCT GCTTCTCGCC AACGCCGCGC GCGCCGAGTC GCTGGGCGAC GGACGGCCCG CCGGTTGCGC GCTGCACGAT CTCAACATCG CCGAGGAGGC TGTTGATTCG GGAGGCAAGA CGTTGCCGCC GTCGAAGGCC GATCCCGACG ATCTCGCCGC CATTCTCTAC ACCAGCGGAT CGACCGGGCG GCCCAAGGGG GTGATGCTCA GCCACGCGAA CCTGTGGCTC GGCGCCGAAA GCGTCGCGAC CTACCTGAAG CTCATGCCCG TCGACCGCGT GCTCGGCGTA TTGCCCTTGA GCTTCGACTA TGGGCAGAAT CAGCTGCTGT CGAGCTGGTA TGCCGGCGCC GCGGTGGCGC CGCTCGATTA TCTGACCGCG CGCGACGTCG TGAAGGCGGT CGCGCGCCAC GACATCACGA CGCTCGCCGG CGTGCCGCCC CTGTGGGTGC AACTCGTCGA GGCGGACTGG CCCGCCGACA CCGCGGCCTT GCTCAAGCGC CTCACCAACA GTGGTGGCGC GCTCACCCCT TCGCTGATCG AGGCGATGCG CCGCACTTTC CCCGCCGCCG ACATCTATCC GATGTACGGG CTGACCGAGG CGTTTCGTTC GACCTGGCTC GATCCCAAAT TCGTCGCCGA CCATCCGACG TCGATGGGGC GTGCGATCCC GCACGCCGAA ATCCTTGTCT GCCGCGGCGA CGGCACGATC ACCGCCGACG AGGAGCCGGG CGAGCTGGTG CATTGTGGCC CGCTCGTCGC CAAGGGCTAT TGGCGCGACG CGGCGCGCAC CGCCGAGCGA TTCCGCCCCG CGCCGCCCGC GTCGCTTTAT GGCGGCACCG CGGTCTGGTC GGGCGACAGG GTGCGGCGTG ATGCGAACGG TCTTCTCTAT TTCGTCGGCC GCGACGATGC GATGATCAAG ACGGCGGGCA ACCGTGTCAG CCCGACCGAG ATCGAGGAGG CTGCGGTCGC TTCGGGGCTG GTCTATGAAG CGGTGGCGTT CGGGGTCCCC GATGCGCGGC TCGGCGCGGC GATCATATTG ATCGTGCGCG GCACGCATGG ACCGGCCGAC GAGGAGGGGC TTGCTGCCTG GCTTCGCCGG AATCTGCCGA ACTTCATGCA GCCGCAGGTC ATCGAATGGC GCGATGCGCT GCCGCGCAAT CCCAATGGCA AGCTCGACCG GGTGGCGATC GCCGCCGATT GGACGAGGGT GATGGCGGCA TGA
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Protein sequence | MTTPENPVSQ PIDHLARRGA PDAAALLIGE RVVTYAELDA GVGLLAAWLR EQAGGPGERV ASWSAKTRLA CLMPLAAARA GLIHVPINPL LKGPQAQHIL ADSGAKLLLA NAARAESLGD GRPAGCALHD LNIAEEAVDS GGKTLPPSKA DPDDLAAILY TSGSTGRPKG VMLSHANLWL GAESVATYLK LMPVDRVLGV LPLSFDYGQN QLLSSWYAGA AVAPLDYLTA RDVVKAVARH DITTLAGVPP LWVQLVEADW PADTAALLKR LTNSGGALTP SLIEAMRRTF PAADIYPMYG LTEAFRSTWL DPKFVADHPT SMGRAIPHAE ILVCRGDGTI TADEEPGELV HCGPLVAKGY WRDAARTAER FRPAPPASLY GGTAVWSGDR VRRDANGLLY FVGRDDAMIK TAGNRVSPTE IEEAAVASGL VYEAVAFGVP DARLGAAIIL IVRGTHGPAD EEGLAAWLRR NLPNFMQPQV IEWRDALPRN PNGKLDRVAI AADWTRVMAA
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