| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1906 |
|---|
| Symbol | |
|---|
| ID | 4082612 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 2005083 |
|---|
| End bp | 2005805 |
|---|
| Gene Length | 723 bp |
|---|
| Protein Length | 240 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638010282 |
|---|
| Product | plasmid partitioning-family protein |
|---|
| Protein accession | YP_616951 |
|---|
| Protein GI | 103487390 |
|---|
| COG category | [D] Cell cycle control, cell division, chromosome partitioning |
|---|
| COG ID | [COG1192] ATPases involved in chromosome partitioning |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 26 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 10 |
|---|
| Fosmid unclonability p-value | 0.283785 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | GTGCGCGTAT TGGCATTGGC TTCACAGAAG GGCGGGTCGG GCAAGACGAC GCTGTCGGGG
CACCTTGCGG TGCAGGCACA GCTTGCCGGC GCCGGTCCCG TCGTCCTCAT CGACATCGAC
CCGCAGGGTT CGCTCGCCGA CTGGTGGAAC GAACGCGAAA CCGACCTTCC CGCCTTTGCA
CAGACCACCG TTGCGCGGCT CGCGTCCGAC CTTGAAATCC TGCGCCAGCA GGGCTTCAAG
CTCGCGGTCA TCGACACCCC GCCCGCGATC ACCATGGCGA TCCAGAGCGT CATTTCGGTC
GCCGAGCTGA TCGTCGTGCC GACGCGCCCC AGCCCGCACG ACCTGCGCGC CGTCGGCGCT
ACCGTCGACC TGTGCGAACG CGCCGGCAAG CCGCTGGTAT TCGTCGTCAA CGCCGCGACC
CCGAAAGCCA AGATTACCAG CGAAGCCGCC GTCGCCCTGT CGCAGCACGG CACCGTCGCC
CCCGTCACGC TGCACCATCG CACCGACTAT GCCGCCTCGA TGATCGACGG CCGCACGGTG
ATGGAGGTCG ATCCGAACGG CCGTTCGGCC GAAGAGATCC GCCAGCTGTG GACCTATATG
AACGACCGGC TCGAAAAGAA CTTCCGCCGC ACCGTTTTCG CCGCGCCGCT GCCCCAACAG
GGCAATTACG GCACGGTTCG CCCGATGGGC GGTGGTTTTG GCCGCCGCAT CGCTGGCCAG
TGA
|
|---|
| Protein sequence | MRVLALASQK GGSGKTTLSG HLAVQAQLAG AGPVVLIDID PQGSLADWWN ERETDLPAFA
QTTVARLASD LEILRQQGFK LAVIDTPPAI TMAIQSVISV AELIVVPTRP SPHDLRAVGA
TVDLCERAGK PLVFVVNAAT PKAKITSEAA VALSQHGTVA PVTLHHRTDY AASMIDGRTV
MEVDPNGRSA EEIRQLWTYM NDRLEKNFRR TVFAAPLPQQ GNYGTVRPMG GGFGRRIAGQ
|
|---|
| |