| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1858 |
|---|
| Symbol | |
|---|
| ID | 4080172 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | - |
|---|
| Start bp | 1952645 |
|---|
| End bp | 1953151 |
|---|
| Gene Length | 507 bp |
|---|
| Protein Length | 168 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 61% |
|---|
| IMG OID | 638010233 |
|---|
| Product | MarR family transcriptional regulator |
|---|
| Protein accession | YP_616903 |
|---|
| Protein GI | 103487342 |
|---|
| COG category | [K] Transcription |
|---|
| COG ID | [COG1846] Transcriptional regulators |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 29 |
|---|
| Plasmid unclonability p-value | 1 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 13 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGGCGAAAG ACAAGCAGGC GTACCGGTAT CCGGCCGAAT ATTATACCAA TCCCGAAAAC
AGCATCGGCT ATCTGGCGCG CGTCGTCTTT CGTTCCTTTT CACGGCTGCT CGAACGCCGC
ACGCTGACGC ATGACGTCTC GGCCGGCCAG TGGCGTTTCC TGCGGCAATT ATGGCGCGAG
GACGGCATTA CCCAGCGCGA GCTGAGCGAG CGCGTCGGGA TGCGCGAGCC GACGACGGTG
GTTGCGCTGA AGGGGCTCGA AAAGGCGGGG TTGATCACGC GCAGGAAGAC CGCCGAGGAC
CGGCGCAAGA CCTTCATCTA TCTGACTCCG CACGCCAAGA AACTCGAACT CATCCTTGCG
CCGATGAATG CCGAGATCCA CGAGATCGCG ACCAAGGGCA TGACCGACGC GGAGGTCGAG
ATGCTGCAAT CGCTGATGCG GCGCGTGATC GACAATCTGG CCGAGGAAAC GCGCAAGCTG
GCGGTGCTGT CCGAAATCAA GGCCTGA
|
|---|
| Protein sequence | MAKDKQAYRY PAEYYTNPEN SIGYLARVVF RSFSRLLERR TLTHDVSAGQ WRFLRQLWRE
DGITQRELSE RVGMREPTTV VALKGLEKAG LITRRKTAED RRKTFIYLTP HAKKLELILA
PMNAEIHEIA TKGMTDAEVE MLQSLMRRVI DNLAEETRKL AVLSEIKA
|
|---|
| |