Gene Sala_1829 details

Gene Information

• Locus tag: Sala_1829
• ID: 4082181
• Type: CDS
• Is gene spliced: No
• Is pseudo gene: No
• Organism name: Sphingopyxis alaskensis RB2256
• Kingdom: Bacteria
• Replicon accession: NC_008048
• Strand: -
• Start bp: 1924391
• End bp: 1925137
• Gene Length: 747 bp
• Protein Length: 248 aa
• Translation table: 11
• GC content: 69%
• IMG OID: 638010204
• Product: hypothetical protein
• Protein accession: YP_616874
• Protein GI: 103487313

Plasmid Coverage information

• Num covering plasmid clones: 9
• Plasmid unclonability p-value: 0.00114945
• Plasmid hitchhiking: Yes
• Plasmid clonability: hitchhiker

Fosmid Coverage information

• Num covering fosmid clones: 10
• Fosmid unclonability p-value: 0.329049
• Fosmid Hitchhiker: No
• Fosmid clonability: normal

Sequence

Gene sequence

ATGCGAAACT GGACGATGGC GGCGCTGCCG CTGATGCTTG CGATGTCCGT GACGGCGTGT 
GGCGCCGGGG TGACGGGCGA GAGCAAGGAT GGCAAACGCA CGGTCGAGGC GGGGCCGACG 
AAATCGCGGG GCTTCGATCT GACCGGCTTT ACCGGCGTCA AGGTCACGGG CCCCGATGAT 
GTGACGATCC GCCGCGGCGA CGCTTTCTCG ATCGTCGCGC GCGGACCGCA GGCGGTGATC 
GACGAGTTGG AAATCGAACT CGACGGCGAC ATGCTGTCGA TCGGCCGGAA AGACTCGATG 
CTTCGGTTCG ACGGGGATCA GACGGTCGAG GTGACGGTCG TGATGCCCGC GCTCCGCGCG 
GTGCGCCTGA CGGGTTCGGG CGCGATCGAC GCCGATGCGA TCGAGGGCGA CGCGGTCGAG 
GCGGTGGTGA CGGGCTCGGG CGACCTCAGG GTTGCGGCGA TGAACGGCAA GCGCGCCAAG 
CTGACGATCA CCGGATCGGG CGATCTGGAG GTGGGCGGCG GCACGATCGG CGCGGGCAAT 
TACGACGTGA CGGGATCGGG CAGCATCGCG GCGAGCGATC TGGCGGCCTC GACGCTCGAC 
GTGTCGATCG CCGGATCGGG CGACGTCGAC GCGCGCGCGA GCGAGAGCGC CGACATTTCG 
ATCCTGGGGT CGGGCGATGC GACGATCGGC GGTGGCGCCA AATGTTCGAC GCGCGCGCTG 
GGGTCGGGCG ACGCGATCTG CAAATGA 

 

Protein sequence

MRNWTMAALP LMLAMSVTAC GAGVTGESKD GKRTVEAGPT KSRGFDLTGF TGVKVTGPDD 
VTIRRGDAFS IVARGPQAVI DELEIELDGD MLSIGRKDSM LRFDGDQTVE VTVVMPALRA 
VRLTGSGAID ADAIEGDAVE AVVTGSGDLR VAAMNGKRAK LTITGSGDLE VGGGTIGAGN 
YDVTGSGSIA ASDLAASTLD VSIAGSGDVD ARASESADIS ILGSGDATIG GGAKCSTRAL 
GSGDAICK