Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1703 |
Symbol | |
ID | 4081106 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1792831 |
End bp | 1793469 |
Gene Length | 639 bp |
Protein Length | 212 aa |
Translation table | 11 |
GC content | 70% |
IMG OID | 638010077 |
Product | hypothetical protein |
Protein accession | YP_616749 |
Protein GI | 103487188 |
COG category | [S] Function unknown |
COG ID | [COG3619] Predicted membrane protein |
TIGRFAM ID | |
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Plasmid Coverage information |
Num covering plasmid clones | 19 |
Plasmid unclonability p-value | 0.346955 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
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Fosmid Coverage information |
Num covering fosmid clones | 25 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
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Sequence |
Gene sequence | ATGATCCGTT TCGACCGCTC GCAGCAGTGG CTCGCCGCCG CGATATCGGC GCTCGCCGGT TTTGTCGACG CGATCGGCTT TGTCGAATCG GGCGGCTTTT TCGTGTCCTT TATGACCGGC AACTCAACGC GGCTGGCCGT CGGTGTTGCC GAATGGTCCC ATGCCGGGCT GGTTGCGGGC GCGATCATCC TGCTGTTCGT CGCCGGCGTG GTCGCCGGTT CGCTGGCTGC CGCGCGTGCC GCCAGACAGC GGAGCGGGGT CATCCTGCTG TTCGTCGCCA CCCTGCTGGC GGCGGCGGGT GGGCTGCGAC TTGCCGATCA GGTGGTTGCC GCCGTCGCGT GCCTGGCGGT CGCGATGGGG ATGGTCAACG CCGCGGTCGA GGGGCGCGGG GGAGCCGTGG TCGGCGTCAC CTATATGACC GGAACGCTGG TGCAGATGGG GCAGAAAATG GCCAATGCCC TGCGCGGGAC CGGCGACGGG CGCTGGTTGC CGCATCTCGC GCTGTGGTCT GCGCTCGTTG CCGGCGCCAT CGTGGGCGCG CGCGTGACGA TCGGGTCCCC GCTGGCCGCC TATGCGCTGG CAACCGTCGG CGCTGCGGCG CTCGGCGGCC GCGCGATATG GGCGATGCGG CGCGCCTGA
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Protein sequence | MIRFDRSQQW LAAAISALAG FVDAIGFVES GGFFVSFMTG NSTRLAVGVA EWSHAGLVAG AIILLFVAGV VAGSLAAARA ARQRSGVILL FVATLLAAAG GLRLADQVVA AVACLAVAMG MVNAAVEGRG GAVVGVTYMT GTLVQMGQKM ANALRGTGDG RWLPHLALWS ALVAGAIVGA RVTIGSPLAA YALATVGAAA LGGRAIWAMR RA
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