Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
Locus tag | Sala_1680 |
Symbol | |
ID | 4081063 |
Type | CDS |
Is gene spliced | No |
Is pseudo gene | No |
Organism name | Sphingopyxis alaskensis RB2256 |
Kingdom | Bacteria |
Replicon accession | NC_008048 |
Strand | - |
Start bp | 1767810 |
End bp | 1768754 |
Gene Length | 945 bp |
Protein Length | 314 aa |
Translation table | 11 |
GC content | 67% |
IMG OID | 638010054 |
Product | hypothetical protein |
Protein accession | YP_616726 |
Protein GI | 103487165 |
COG category | |
COG ID | |
TIGRFAM ID | |
|
|
Plasmid Coverage information |
Num covering plasmid clones | 18 |
Plasmid unclonability p-value | 0.394553 |
Plasmid hitchhiking | No |
Plasmid clonability | normal |
| |
Fosmid Coverage information |
Num covering fosmid clones | 23 |
Fosmid unclonability p-value | 1 |
Fosmid Hitchhiker | No |
Fosmid clonability | normal |
| |
Sequence |
Gene sequence | ATGCGAAATG ACGATCGTTC CCGCTGTCTG CTCGATCTCG TCCGGCGTGA CCGGCCCCGC TGGTTGCAGC ATGGCCGGGC GATCGGACGG CGCGAAGTGT CGCAGGCGCA GGAGTCGGTC GGCGCCACCG GCATTGCGGA AGACGAACTG GTCGCGTTGA CCCGGCGTCT GTCGCCCGAC CTGCCGCCCG CTGCGCTGTC GCCGGGCGAG GTCGATACGC TGGAGGCCAT CGTTCACACC GAATTGCGCC CCGCGCTGCT GGTGCAGGAC GGCACTTTCC TGCCGCCACC GGAGGAATGG CGGCACCTTG AAGCCCATCG CGCGGGGATC GACCATGCGA TCGCGCGGAC GTGCCGGATC GAGACCGAGG GCGCCATCGC GCTCGACTGG GTCGGCACGG GCTTTGTCGT CGCGCCCGAC CTGGTTGCGA CCAACCGCCA TGTCGTGCAG GAGTTTGCAT CACATGAGCC GGGCCGCGGC TGGCGGATCC ACGAGGGCAT CGCGGTGCGC GCCGACTTTC GGCAGGAAAT CGGCAGCACC GCGGTCGCGG ACGTGCCGGT GGCGGGCATC TGGGGGGTCC ATGACCGCTT CGACATTGCG ATCCTGCAAA TGCGGCCCGG CCTCTGTCCC AGTCCGATCC CGACCGGGCT TTCCAACCTG ACCGCGGCGC GCGATGTCGT GGTCATCGGC TATCCCGCCT ATGACTCGCG GCGCAACGAC GCCGCGGTGA TGGATCGCAT CTTTCGCGGC ATCTATAATG TGAAGCGCGT GCAGCCGGGG CGGATCATGC TGCGCGATAC GGTCAATTAT CTGCTGCGGC ACGACAGTTC GACGCTCGGC GGCAATTCGG GGTCGCCGGT GATTGATGTC CGGAGCGGCC GCCTCGTCGG GATTCACTTT CGCGGGCAAT ATCTGCGGTG GAACGACGCG GTCGACGTTT CCTGA
|
Protein sequence | MRNDDRSRCL LDLVRRDRPR WLQHGRAIGR REVSQAQESV GATGIAEDEL VALTRRLSPD LPPAALSPGE VDTLEAIVHT ELRPALLVQD GTFLPPPEEW RHLEAHRAGI DHAIARTCRI ETEGAIALDW VGTGFVVAPD LVATNRHVVQ EFASHEPGRG WRIHEGIAVR ADFRQEIGST AVADVPVAGI WGVHDRFDIA ILQMRPGLCP SPIPTGLSNL TAARDVVVIG YPAYDSRRND AAVMDRIFRG IYNVKRVQPG RIMLRDTVNY LLRHDSSTLG GNSGSPVIDV RSGRLVGIHF RGQYLRWNDA VDVS
|
| |