| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1443 |
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| Symbol | |
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| ID | 4081525 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1491180 |
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| End bp | 1492136 |
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| Gene Length | 957 bp |
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| Protein Length | 318 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638009808 |
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| Product | palmitoyl-CoA hydrolase |
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| Protein accession | YP_616489 |
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| Protein GI | 103486928 |
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| COG category | [I] Lipid transport and metabolism |
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| COG ID | [COG1946] Acyl-CoA thioesterase |
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| TIGRFAM ID | [TIGR00189] acyl-CoA thioesterase II |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 18 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | TTGGACGATC GCATGAGCCT GACTCCCGCC GCGATTCAGG CTCGCATCGA ACGCGCGCGC
AAAATCCAGG CCGCCGTTCC GCCCGAAAAG GTCGTCGCCG CGGTGACGCG CCTGTTCGAC
CTCGAACCCG TCGCGGGGCT GGAGGACGAG TTCACCTTTC CCGCCTTTGC CAAGCCGACG
CGCCAGCGCA TTTTCGGCGG GCAGGTGATC GCGCAGGCGC TCGTCGCGGC GGCGCGCACC
GTCGATCCGG GCAAGGCGGC GCATTCGCTG CACGCCTATT TCCTGCGCGG CGGCGACGAG
GCCAAGCCGC TGCATTTCCG CGTCCACCGC GATTTCGACG GGCGCAGCTT CGCCAATCGC
CGCGTCGTCG TGCGGCAGGA TGGCAAGGTG ATCTTCAACC TCACCGCATC CTTTCACGCG
CCCGAGCCGG GCGTCGCGCA CCAGACGCCG ATGCCCGACC TGCGGCCACC CGAAGACTGC
GCCGAGTTCG TCGAGAACAT CGCCGCCGAC CCCAATGTCA GCGACGCGCA ACTTGACCAG
ATGGCGTGGC TGCGGCCGTT CGAGATGCGC AGTTCCCGCC CGCCCTCGAC CGAAGCGGCG
ACGGCGCATT ATCAATGGTA CCGGCTTGCG GCGCCGATCG GCGACGATCC GCTGCTCCAT
CGCGCGTTTC TGGCCTATGC CTCGGATATG GGGCTTTTGT CCTCGTCGCT CCGGCCGCAC
GGGTTCACCT GGTCGACGCC GGGGCTTTTC TCGACCAGCC TCGATCATGC GATGTGGTTC
CACGACGACA TCCGTGTCGA CGACTGGTTC GTCTATGTGA TGGACAGCGA TTGGACCGGC
GGCAGCCGCG GCATCAATCG CGGCCTGATC TATCGCCAGG ACGGCACGCT GATCGCTTCG
GCGATGCAGG AAGGATTGCT GCGCATCACG CCCTCCGAAG GCGCTGCGGG CGGATAG
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| Protein sequence | MDDRMSLTPA AIQARIERAR KIQAAVPPEK VVAAVTRLFD LEPVAGLEDE FTFPAFAKPT
RQRIFGGQVI AQALVAAART VDPGKAAHSL HAYFLRGGDE AKPLHFRVHR DFDGRSFANR
RVVVRQDGKV IFNLTASFHA PEPGVAHQTP MPDLRPPEDC AEFVENIAAD PNVSDAQLDQ
MAWLRPFEMR SSRPPSTEAA TAHYQWYRLA APIGDDPLLH RAFLAYASDM GLLSSSLRPH
GFTWSTPGLF STSLDHAMWF HDDIRVDDWF VYVMDSDWTG GSRGINRGLI YRQDGTLIAS
AMQEGLLRIT PSEGAAGG
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