| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1379 |
|---|
| Symbol | |
|---|
| ID | 4081851 |
|---|
| Type | CDS |
|---|
| Is gene spliced | No |
|---|
| Is pseudo gene | No |
|---|
| Organism name | Sphingopyxis alaskensis RB2256 |
|---|
| Kingdom | Bacteria |
|---|
| Replicon accession | NC_008048 |
|---|
| Strand | + |
|---|
| Start bp | 1435298 |
|---|
| End bp | 1435786 |
|---|
| Gene Length | 489 bp |
|---|
| Protein Length | 162 aa |
|---|
| Translation table | 11 |
|---|
| GC content | 67% |
|---|
| IMG OID | 638009745 |
|---|
| Product | hypothetical protein |
|---|
| Protein accession | YP_616426 |
|---|
| Protein GI | 103486865 |
|---|
| COG category | [S] Function unknown |
|---|
| COG ID | [COG4731] Uncharacterized protein conserved in bacteria |
|---|
| TIGRFAM ID | |
|---|
| 
|
Plasmid Coverage information |
| Num covering plasmid clones | 23 |
|---|
| Plasmid unclonability p-value | 0.951506 |
|---|
| Plasmid hitchhiking | No |
|---|
| Plasmid clonability | normal |
|---|
| |
Fosmid Coverage information |
| Num covering fosmid clones | 18 |
|---|
| Fosmid unclonability p-value | 1 |
|---|
| Fosmid Hitchhiker | No |
|---|
| Fosmid clonability | normal |
|---|
| |
Sequence |
| Gene sequence | TTGCCAGCAT GGTGCAAGAC TGGGGCAAAG CCAAGCCGCT TGCCGACAGG CTGGTCGCTG
CCGGGGGAGG TCGCATTGTT TCTCCGAATT GTCCTGGCGC TCGGCGCCTT TATCGCCGTG
CCGTCGCTCG CCGCCGCGCC ATCCGCCCTC GCGGGCCGCT GGAAAACCGA CGACGGCAAA
GGGATCGTGG TGATGAGCCC ATGCGGCGCA AAGATGTGCG GCCATATCGA GCGGCTGCTC
ATCAAACAGC CCGCGGGCGG CCAGCTCGAC GAGCGCAACC CCGACAAGAC CAAGCGCGGC
CGCCAGGTAA CGGGCCTGCG CATCTATTGG GATCTCGCCC CGCACGGCGA CGGCTGGAAA
GGGCAGGGCT ACAGCCCCGA GGACGGCCGC TATTACAAGG CGCATCTGAG CGTGAAGGGC
GACCGGATGA CCATGAAGGG CTGCGTCGCG GTCTTCTGCC GCACGGTGAC TTGGACGCGC
GTGGGGTAA
|
|---|
| Protein sequence | MPAWCKTGAK PSRLPTGWSL PGEVALFLRI VLALGAFIAV PSLAAAPSAL AGRWKTDDGK
GIVVMSPCGA KMCGHIERLL IKQPAGGQLD ERNPDKTKRG RQVTGLRIYW DLAPHGDGWK
GQGYSPEDGR YYKAHLSVKG DRMTMKGCVA VFCRTVTWTR VG
|
|---|
| |