| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1157 |
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| Symbol | |
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| ID | 4080863 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1190798 |
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| End bp | 1191778 |
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| Gene Length | 981 bp |
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| Protein Length | 326 aa |
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| Translation table | 11 |
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| GC content | 64% |
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| IMG OID | 638009518 |
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| Product | LysR family transcriptional regulator |
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| Protein accession | YP_616206 |
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| Protein GI | 103486645 |
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| COG category | [K] Transcription |
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| COG ID | [COG0583] Transcriptional regulator |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 21 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 10 |
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| Fosmid unclonability p-value | 0.329049 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGCGACCAT CCTGGCGGCG AATTTTAATC GGCTGCCTTG TTCAAAGTCG CCCAATAAAT
CCCTACACTC GATCAATGCA AAATTACCTG CCTTCACTCA AACAGATGCA ATATCTCGTG
GCGCTGCACG AACATGGTCA TTTCGGCCGC GCCGCCGATG CGTGCAATGT CACCCAGTCG
ACGCTGTCGG CAGGCATCCG CGAACTGGAA ACCTTGCTGG GGCAAACGCT CGTCGAGCGC
ACGCGCCGCG TCGTGCGCTT CACCGCGCTC GGCAACAAGA TCGTCGAGAA GGCGCACCGC
GTGCTGCGCG AGGCCGAGGA GCTTGCCGAC ATGGCCGCCG CTGCATCGGC GCCGCTCGTT
GGCGAACTGC GCATGAGCGT CATCCCGACG ATCGCGCCCT TCCTGCTCCC CGGCCTCCTT
CCCCGGCTCC GCAAGGAGCG TCCGTCGCTC AAGCTGTTCC TGCGCGAAGA GCCAAGTGCG
CAGGCGTGCG AGTCGCTTCA CCACGGCGCC GTCGATTGCG TGCTGCTCGC GCTCCCCTAT
GCGTGCGGCG ACGTCGAAAG CGAAGAATTG TTCGACGATG CGCTGTTCGT CGCCTTTCCC
GGCGATCAGT CCGAAGACCT GCCCGCGACG GTCAGCGCCG ACCAGATCGA CCCTGCCCAG
ATGTTGATGC TAGAGGACGG GCATTGCCTG AAAGATCACG CACTCGCGGC GTGCAACCGT
CCCGAACTGC GTGCCGGCGC GCGGATGATG GGCACTTCGC TGCACACGCT GGTGCAGATG
GTCGACAACG GCCTTGGCAT CACCATGCTG CCGCAAATGG CGATCGAGGC GGGCATCCTC
GATCACACCG ACATCGACAC GCGCCCGCTC GATTCGGCGC ATGACTGGCG AACGATCGCG
CTCGTCTGGC GCAAGGGCAG CCCACGCGCC GAGGAGTTCC GCATGCTCGC CGATATTTTC
AGGAAGCATC AGGCGGGATA G
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| Protein sequence | MRPSWRRILI GCLVQSRPIN PYTRSMQNYL PSLKQMQYLV ALHEHGHFGR AADACNVTQS
TLSAGIRELE TLLGQTLVER TRRVVRFTAL GNKIVEKAHR VLREAEELAD MAAAASAPLV
GELRMSVIPT IAPFLLPGLL PRLRKERPSL KLFLREEPSA QACESLHHGA VDCVLLALPY
ACGDVESEEL FDDALFVAFP GDQSEDLPAT VSADQIDPAQ MLMLEDGHCL KDHALAACNR
PELRAGARMM GTSLHTLVQM VDNGLGITML PQMAIEAGIL DHTDIDTRPL DSAHDWRTIA
LVWRKGSPRA EEFRMLADIF RKHQAG
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