| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1091 |
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| Symbol | |
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| ID | 4081566 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1119311 |
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| End bp | 1121290 |
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| Gene Length | 1980 bp |
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| Protein Length | 659 aa |
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| Translation table | 11 |
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| GC content | 65% |
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| IMG OID | 638009452 |
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| Product | DNA topoisomerase IV subunit B |
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| Protein accession | YP_616141 |
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| Protein GI | 103486580 |
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| COG category | [L] Replication, recombination and repair |
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| COG ID | [COG0187] Type IIA topoisomerase (DNA gyrase/topo II, topoisomerase IV), B subunit |
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| TIGRFAM ID | [TIGR01055] DNA topoisomerase IV, B subunit, proteobacterial |
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Plasmid Coverage information |
| Num covering plasmid clones | 22 |
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| Plasmid unclonability p-value | 1 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 17 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGAGTCACG ATTTGTTCGA CGCCGCGATC CCCGCTTCCG ACAGCTATAA TGCGTCGCAG
ATCGAGGTGC TGGAGGGGCT CGAACCCGTC CGCCGCCGCC CCGGCATGTA TATCGGAGGG
ACCGACGAGC GCGCGCTGCA CCATCTCGCC GCCGAGGTGA TCGACAACAG CATGGACGAG
GCGGTCGCGG GTCATGCGAC GCGCATCGAG GTTACGCTCG ACGTCGGCAA CCGGCTCACG
ATCGTCGACA ACGGGCGCGG GATGCCGGTC GATCCGCATC CGAAGTTTCC GGGCAAGTCG
GCGCTCGAGG TCATCATGAC CATGCTCCAT TCGGGCGGCA AGTTCGAGGG CAAGGCCTAT
GCAACCTCGG GCGGCCTTCA CGGTGTCGGA GTGAGCGTCG TCAACGCGCT GTCGGTCGAG
ACCGAGATCG AGGTCGCGCG CGCCAAACAG CTTTATCGTC AGCGCTTCGC GCGCGGGGCG
CCGCTCGGTC CGCTCGAAGA ATTGGGGGCC ACGCCGAACC GGCGCGGCAC CAGCGTTTCC
TTTATCCCCG ACCCCGAAAT CTTCGGCGAG CATGGCCGCT TCAAGCCGCA GCGGCTTTAC
CGCTTGGCAC GCTCGAAGGC CTATCTCTTC GCCGGCGTGG AAATACGCTG GAAATGCGCA
CCCGCGCTGA TCGGCGACGA CACGCCCAGC GAGGCGGTTT TCCAGTTCCC CGGCGGCTTG
GCCGACCATC TCAAGGAGCA GATCGGCGCC CGCGAATGCG CGACTGCCGA TCCCTTTGTC
GGGCGACAGG ATTTTCCGGG CGATCAGGGC CGCGCCGAAT GGGCGATCGC CTGGCCACTG
TGGTCCGATG GTTCCTACAG CTGGTATTGC AACACCATCC CCACCCCCGC GGGCGGGACG
CACGAGGCCG GGCTGCGCGC GGCGCTGACC AAGGGCCTGC GCGCGTTCGG CGAGCTGATC
GGCCAGAAAA AGGCGGCGCA GATCACCGCC GAGGACGTTT TCAACGGCAG CGAGATGATG
CTCTCGGTCT TCATCCGCGA CCCCCAGTTC CAGAGCCAGA CCAAGGACCG GCTGTCCAGC
CCCGAGGCCG CGCGCCTGAC CGAAAATGCC GTGCGCGATC ATTTCGACCA TTTCCTGTCG
GACAATATGG ACCGCGGCCG CGCGCTGCTG GGCCTCGTTC TCGACCGGAT GGACGAGCGG
CTGAAGCGCA AGGCCGAGCG CGAGGTCAAG CGCAAGACCG CGACGAGCGG ACGCAAGCTC
CGCCTGCCCG GCAAGCTCAC CGATTGCGCG AACGACGGCC CCGAAGGCAC CGAGCTTTTC
ATCGTCGAAG GCGACAGCGC GGGCGGCAGC GCCAAGCAGG CACGCGACCG CAAGACGCAG
GCGATCCTAC CGATCCGCGG CAAGATATTG AACGTCGCGA GCGCCAGCGC CGACAAGATC
CGCGCCAATC AGGAGATCGC CGACCTGGCG CTCGCGCTCG GTTGCGGGAT GCGCAAGGAT
TGCGATGCCG ACCGGCTAAG ATACGAAAAA ATTGTCATTA TGACCGACGC CGATGTCGAC
GGCGCGCATA TCGCGACCTT GCTGATGACC TTCTTCTTTC AGGAGATGCC CGACATCGTC
CGGAACGGGC ATGTCTATCT CGCGCAGCCG CCGCTTTACC GTCTGACCGC GGGCGGCCTC
TCGGCCTATG CGCGCGACGA CGCGCACCGC GCCGAGCTGG AGGCAACGCT GTTCAAGGGC
AAGAAGGTCG AGGTCGGCCG GTTCAAGGGG CTGGGCGAAA TGAACCCGAA CCAGCTCAAG
GAAACGACGA TGGACCCCGC CACGCGCAGC CTGCTGCGCG TCACGCTGCC GCAGGAATAT
GAAGAGCGTC ATCTGGTCAA GGACCTTGTC GACCGGCTGA TGGGCAGGAA CCCTGAACAT
CGTTTCCAGT TCATCCAGGC CAATGCCGCC AGCCTCGACG AGGCCGCGAT CGACGCCTAG
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| Protein sequence | MSHDLFDAAI PASDSYNASQ IEVLEGLEPV RRRPGMYIGG TDERALHHLA AEVIDNSMDE
AVAGHATRIE VTLDVGNRLT IVDNGRGMPV DPHPKFPGKS ALEVIMTMLH SGGKFEGKAY
ATSGGLHGVG VSVVNALSVE TEIEVARAKQ LYRQRFARGA PLGPLEELGA TPNRRGTSVS
FIPDPEIFGE HGRFKPQRLY RLARSKAYLF AGVEIRWKCA PALIGDDTPS EAVFQFPGGL
ADHLKEQIGA RECATADPFV GRQDFPGDQG RAEWAIAWPL WSDGSYSWYC NTIPTPAGGT
HEAGLRAALT KGLRAFGELI GQKKAAQITA EDVFNGSEMM LSVFIRDPQF QSQTKDRLSS
PEAARLTENA VRDHFDHFLS DNMDRGRALL GLVLDRMDER LKRKAEREVK RKTATSGRKL
RLPGKLTDCA NDGPEGTELF IVEGDSAGGS AKQARDRKTQ AILPIRGKIL NVASASADKI
RANQEIADLA LALGCGMRKD CDADRLRYEK IVIMTDADVD GAHIATLLMT FFFQEMPDIV
RNGHVYLAQP PLYRLTAGGL SAYARDDAHR AELEATLFKG KKVEVGRFKG LGEMNPNQLK
ETTMDPATRS LLRVTLPQEY EERHLVKDLV DRLMGRNPEH RFQFIQANAA SLDEAAIDA
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