| Gene Information Plasmid Coverage information Fosmid Coverage information Sequence |
Gene Information |
| Locus tag | Sala_1007 |
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| Symbol | |
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| ID | 4081695 |
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| Type | CDS |
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| Is gene spliced | No |
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| Is pseudo gene | No |
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| Organism name | Sphingopyxis alaskensis RB2256 |
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| Kingdom | Bacteria |
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| Replicon accession | NC_008048 |
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| Strand | - |
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| Start bp | 1031852 |
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| End bp | 1033567 |
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| Gene Length | 1716 bp |
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| Protein Length | 571 aa |
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| Translation table | 11 |
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| GC content | 67% |
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| IMG OID | 638009367 |
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| Product | AMP-dependent synthetase and ligase |
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| Protein accession | YP_616057 |
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| Protein GI | 103486496 |
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| COG category | [I] Lipid transport and metabolism
[Q] Secondary metabolites biosynthesis, transport and catabolism |
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| COG ID | [COG0318] Acyl-CoA synthetases (AMP-forming)/AMP-acid ligases II |
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| TIGRFAM ID | |
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Plasmid Coverage information |
| Num covering plasmid clones | 12 |
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| Plasmid unclonability p-value | 0.153732 |
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| Plasmid hitchhiking | No |
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| Plasmid clonability | normal |
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Fosmid Coverage information |
| Num covering fosmid clones | 13 |
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| Fosmid unclonability p-value | 1 |
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| Fosmid Hitchhiker | No |
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| Fosmid clonability | normal |
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Sequence |
| Gene sequence | ATGATCGTCG CGGGAGAGGA TAAACGGCGG CGTTATCGGC AAAGCGGCTG GTGGGGCGAC
CAGAGCTTTG CCGACCTGTT CGCGGCCAAT GCGGCGGCGC ATCCCGACCG GCTCGCGCTC
GTCGACGCAC CGAACCGCGC CGATTTTGCC TTCGGCGAAC CGCGGCGGCT GACCTATGCC
GAGTTGGCGG CGGAGATCGA CCGGCTCGCG GGCGCGCTCG TCGCCGCGGG GATCGGCAAG
GACGATGTGC TGCTGGTTCA GCTTCCCAAC ATCGGCGAAT TTGTCGCGCT CTATTTCGCG
GCGGCCAAGA TCGGTGCGAT CGTCAGCCCG GCGGCGGTGC AGTATCGCAG CCACGAGCTG
ACGGGCATGA TCGGCGTCGT CGAACCAAAA GCGTTCGTCT GCGCCACGCG GGTCAAGGGC
TGCGACCATG TCGGCGTCGC AGCGCCGTTG CTCGAAGGGA TCGCGCTGAT GACCTTCGGC
CCCAGCCCGC CCGCGGACGC ACTGGACCTG TCGACCGCCC AAGGCGACGC CACCGCGCTT
GCCGCGCATG TCGCGGCAAA CCCGGTTGAT GCCGACGATA TCTTCACCAT CTGCTGGACC
TCGGGCACCA CCGGCGTGCC AAAGGGCGTG CCGCGCAGCC ACAACCACTG GATAGCGGTT
GCCGCCGCGG GCTACGAGGC GATGAAGGTC GAGCCGGGCG ATGTGCTGCT CAACCCCTTC
CCGCTCATCA ACATGGCGAG CATCGGCGGC ATCACCATGT GCTGGCTGAC CAGCGCGGGG
ACGATGGTGC TGCACCATCC GTTCGATCCC GGCGTGTACC TCAAGCAGAT TGCGACCGAG
CGGCCCAGCC TGACGATCGC GCCGCCCGCG GTGCTCAACA TGCTGCTGCA GAATGAGGCT
TTGCTCGCCT CGGTGGACCT GTCGAGCCTG CGCGTCATTG CCTCGGGCTC GGCACCGCTC
GCCCCCGCGA TGGTGCGCGG TTTCCAGGAA AAGCTCGGCA TCATCATCGT CAACGTCTTT
GGCTCCAACG AGGGTATGAG CTTCATCACC GGCGAGGGCG ACATGCCCGA CCCCGACAAG
CGCGCGAGCC TTTTCCCGCG CCGCGGTCAA TATCCGCCGC CCTATGGCAC CGGCCGCGCG
CCCAACATCG AAAGCCGCCT CGTCCCGCCC GGCGGCGGCG ACCCGATCGA GATGGACGGC
ATGGCGGGCG AGTTGCAGAT CCGCGGCCCC AGCCTGTTCG AAGGCTATCA CAACGCCCCC
GAACAGACCG CCGCCGCCTT CACCGATGAC GGCTGGTTCC GCACCGGCGA CCTGTTCGAG
ATCGCCGAAG GCGGCGACTT CTACCGCTTC GTCGGACGCT GCAAGGATCT CATCATTCGC
GGCGGAGTGA ATATCGCGCC CGAGGAGATC GACCAACTGC TCGGCGGCCA TCCACTCCTG
GCCGAAGCGT GCGTCTTCTC GCTCCCCGAC CCCACGATGG GCGAGCGTAT CGGCCTTGCC
TATGTCCCGC GCGGCGCGGA CGATGTCAGC CTTGCCGACG TGACCGACTA TCTCCGCGCA
AAGGATCTTG CGGTGTTCAA GCTGCCCGAA CGCCTGTTCC GCTTCGACGC GCTGCCGCGC
AACGTCACGG GCAAGGTGAT GCGCAGCGAG GTGCGCGAAA TGGCGCTTGC GCAGCTCTCC
CTGAACAACC CCTCCCCTTC AGGGGAGGGG CAGTGA
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| Protein sequence | MIVAGEDKRR RYRQSGWWGD QSFADLFAAN AAAHPDRLAL VDAPNRADFA FGEPRRLTYA
ELAAEIDRLA GALVAAGIGK DDVLLVQLPN IGEFVALYFA AAKIGAIVSP AAVQYRSHEL
TGMIGVVEPK AFVCATRVKG CDHVGVAAPL LEGIALMTFG PSPPADALDL STAQGDATAL
AAHVAANPVD ADDIFTICWT SGTTGVPKGV PRSHNHWIAV AAAGYEAMKV EPGDVLLNPF
PLINMASIGG ITMCWLTSAG TMVLHHPFDP GVYLKQIATE RPSLTIAPPA VLNMLLQNEA
LLASVDLSSL RVIASGSAPL APAMVRGFQE KLGIIIVNVF GSNEGMSFIT GEGDMPDPDK
RASLFPRRGQ YPPPYGTGRA PNIESRLVPP GGGDPIEMDG MAGELQIRGP SLFEGYHNAP
EQTAAAFTDD GWFRTGDLFE IAEGGDFYRF VGRCKDLIIR GGVNIAPEEI DQLLGGHPLL
AEACVFSLPD PTMGERIGLA YVPRGADDVS LADVTDYLRA KDLAVFKLPE RLFRFDALPR
NVTGKVMRSE VREMALAQLS LNNPSPSGEG Q
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